Tuwongella immobilis: GMBLW1_11000
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Entry
GMBLW1_11000 CDS
T06428
Name
(GenBank) exonuclease : Exonuclease OS=delta proteobacterium MLMS-1 GN=MldDRAFT_3354 PE=4 SV=1: RNase_T
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tim
Tuwongella immobilis
Pathway
tim03030
DNA replication
tim03430
Mismatch repair
tim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GMBLW1_11000
03430 Mismatch repair
GMBLW1_11000
03440 Homologous recombination
GMBLW1_11000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tim03032
]
GMBLW1_11000
03400 DNA repair and recombination proteins [BR:
tim03400
]
GMBLW1_11000
Enzymes [BR:
tim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GMBLW1_11000
DNA replication proteins [BR:
tim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GMBLW1_11000
DNA repair and recombination proteins [BR:
tim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GMBLW1_11000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
VTS02668
UniProt:
A0A6C2YMN9
LinkDB
All DBs
Position
1:complement(2923687..2924274)
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AA seq
195 aa
AA seq
DB search
MATKSKLVLPKREESFLAIDFETADYQSDSPCAIGLARVEGNEIVHKESHLIRPPRSRIL
FTHIHGITWNHVRSCPTFQELWPMISHHFVGIHYLVAHNAGFDRKVLLTSCEIAGITPPS
VPFLCTVQISKACWQTKPNDLASVCQRLKIGLNHHDAGSDAEAAARIMIAAIQMKTPSES
PQHEPPTLFRELPSS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacaaaatcgaaactcgtcttgccaaagcgggaagaatcatttctcgcaattgac
tttgaaactgccgattatcagtctgactccccttgtgcaatcggattggctcgagtcgag
gggaatgagattgttcacaaagaatctcatctgattcggccgcctcgttctcgaattctg
tttacgcatatccatggaatcacatggaatcacgttcggagttgtccgacctttcaagaa
ctttggccgatgatctcacatcactttgttggaattcactacttggttgcgcataacgcc
ggctttgaccgcaaagtacttctgacttcctgcgagattgcgggaattactcccccttca
gtgccatttctctgcacagtgcaaatctcaaaagcgtgttggcagacgaagcctaacgat
ttggcaagcgtctgccaacgacttaaaattggtctgaaccaccatgatgctgggtcagat
gccgaggctgcggcccgaattatgatcgctgcaattcagatgaaaacgccatcggaatcg
ccccagcatgagccaccgactttatttcgtgagcttccatccagctga
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