Tuwongella immobilis: GMBLW1_13530
Help
Entry
GMBLW1_13530 CDS
T06428
Name
(GenBank) diaminopimelate epimerase : Diaminopimelate epimerase OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=dapF PE=3 SV=1: DAP_epimerase: DAP_epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tim
Tuwongella immobilis
Pathway
tim00300
Lysine biosynthesis
tim00470
D-Amino acid metabolism
tim01100
Metabolic pathways
tim01110
Biosynthesis of secondary metabolites
tim01120
Microbial metabolism in diverse environments
tim01230
Biosynthesis of amino acids
Module
tim_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GMBLW1_13530
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GMBLW1_13530
Enzymes [BR:
tim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GMBLW1_13530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
DHODB_Fe-S_bind
Fer2
Motif
Other DBs
NCBI-ProteinID:
VTS01909
UniProt:
A0A6C2YML5
LinkDB
All DBs
Position
1:2592845..2593684
Genome browser
AA seq
279 aa
AA seq
DB search
MRFTKMQGAGNDYVYVNCFQEPVPADPAKVSIAVSDRHFGIGSDGMILICPSEVADAKMR
MFNADGSESEMCGNGLRCVAKYVYDHGIARKPELALETGRGILHVKLDVQNDKAVRATID
MGEPILKSEMIPTTLPGDPPINHPLEVGGRTLHVTCVSMGNPHCISFVEELDDALVHGIG
PLVEKHSVFPRRVNAEFIRINSRTDATMRVWERGSGETLACGTGACAVCVAGVLTGKMDR
KITIHLLGGDLELHWSEADNHVYMTGPAVEVFSGEWPSE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttacgaaaatgcaaggtgccggcaacgattacgtctacgtgaactgcttccag
gagccggtcccggctgatcccgccaaggtcagcatcgccgtttccgatcggcacttcggc
attggttcggatgggatgattctcatttgtccatccgaagtggccgatgccaagatgcgc
atgttcaatgccgacggttcggaatcggaaatgtgcggcaacggccttcgctgtgtcgcc
aaatatgtctacgatcacggcattgcccgcaaacccgaattggcattggagaccggccga
ggcatcctgcatgtcaaactcgatgtgcagaatgacaaagcggtccgcgccacgattgat
atgggtgagccgattctgaagagtgaaatgattccgacgacgctgccgggcgatccgccg
atcaatcacccgctcgaagtcggtggccgcacgttgcacgtcacctgtgtctcgatgggc
aatccgcactgcattagcttcgtcgaagaattggatgatgccctcgtccacgggattggc
ccgttggtggagaagcattcggtgtttccgcggcgggtgaatgccgagtttatccgaatt
aactcccgtaccgatgcaacgatgcgcgtgtgggagcgtggatcgggggagacgctggcc
tgtggcaccggggcgtgtgcggtctgcgtggccggtgtgctgaccggaaagatggatcga
aagatcacgattcatcttctcgggggcgatctggaattgcactggtccgaagccgataat
catgtttacatgacaggcccggccgtggaagtgttctctggcgaatggccgtcagagtaa
DBGET
integrated database retrieval system
