Tuwongella immobilis: GMBLW1_13760
Help
Entry
GMBLW1_13760 CDS
T06428
Name
(GenBank) rna polymerase sigma70 : RNA polymerase sigma factor OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7408 PE=3 SV=1: Sigma70_r2: Sigma70_r3: Sigma70_r4
KO
K02405
RNA polymerase sigma factor FliA
Organism
tim
Tuwongella immobilis
Pathway
tim02020
Two-component system
tim02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GMBLW1_13760
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GMBLW1_13760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tim03021
]
GMBLW1_13760
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tim02035
]
GMBLW1_13760
Transcription machinery [BR:
tim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GMBLW1_13760
Bacterial motility proteins [BR:
tim02035
]
Flagellar system
Flagellar assembly proteins
Stator
GMBLW1_13760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_28
MarR_2
GerE
Motif
Other DBs
NCBI-ProteinID:
VTS01841
UniProt:
A0A6C2YMJ0
LinkDB
All DBs
Position
1:2569239..2570033
Genome browser
AA seq
264 aa
AA seq
DB search
MVMQAEVDVSQMWQTYQQVRTTDEAQTTELRNLLVERYLPLVKYNAERIWARLPDGVELD
DLISAGVFGLMDAIDAFDLSRGVKFETYCVPRIRGAMLDELRTMDWVPRLVRSKASQFEQ
ARKSLEIDLGRPPRPEELAAKLGVPLEQLDEVVGQATAVGLVSLNKKWYETDSYKDVREI
DIIEDKKAEDPTHRLQNGDLMRLVTRGLNRNERLIIILYYYEDMTMKEIGATLDLSESRV
SQMHSSIVARLQSQLGKRRPEFSN
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgcaagcggaagtggatgtgtcgcaaatgtggcagacctatcaacaggttcgt
accacggatgaggcgcagaccactgaactgcggaatttgctcgtcgaacggtatctaccg
ttggtcaagtacaatgcggaacggatctgggcacggcttcccgacggtgtggaactcgac
gatctcatcagcgccggcgtgttcgggctgatggatgccatcgatgccttcgatttgtcg
cgcggtgtcaagttcgaaacgtactgtgtgcctcgaattcggggtgccatgctcgatgaa
ctgcgcaccatggactgggtgcctcgattggttcgatcgaaggccagccagttcgaacaa
gcacgcaaatcgctggaaatcgacctcggtcgtccaccgcgtccggaagaattggccgcc
aaactcggcgtgcctttggaacaactcgatgaagtggtgggacaagccacggcagtcggg
ttggtcagcctgaacaaaaaatggtacgaaaccgattcgtacaaggatgtccgagaaatc
gacatcatcgaagataagaaggccgaagatccaacgcaccgcctgcaaaatggcgatctg
atgcgcttggtgacccgcgggctgaatcgcaatgaacgcctcattatcattctgtattat
tacgaagatatgacgatgaaggaaatcggcgcgactctggacctgagcgaatcgcgcgtc
tcgcaaatgcactccagcattgtggcccgtttgcaatcgcaactgggcaaacgccgtccg
gaattcagcaattaa
DBGET
integrated database retrieval system
