Tuwongella immobilis: GMBLW1_15210
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Entry
GMBLW1_15210 CDS
T06428
Name
(GenBank) diaminopimelate decarboxylase : Diaminopimelate decarboxylase OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=lysA PE=3 SV=1: Orn_Arg_deC_N: Orn_DAP_Arg_deC
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tim
Tuwongella immobilis
Pathway
tim00300
Lysine biosynthesis
tim00470
D-Amino acid metabolism
tim01100
Metabolic pathways
tim01110
Biosynthesis of secondary metabolites
tim01120
Microbial metabolism in diverse environments
tim01230
Biosynthesis of amino acids
Module
tim_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GMBLW1_15210
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GMBLW1_15210
Enzymes [BR:
tim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GMBLW1_15210
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
VTS01401
UniProt:
A0A6C2YMK1
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All DBs
Position
1:complement(2376652..2377941)
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AA seq
429 aa
AA seq
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MDHFQYCDGQLYCEKIPVAELAAKYGTPLFIYSEATLLHHLKEIQSAFAAVNPVICYSVK
SNGNLSIAKLMVDHGAGCDVTSGGELYRALKAGTPGNRIVFAGVGKSDDEMRMALEAGVL
LFDVESEAELHVLGEVAKSIGKVAPVALRVNPALPPKTHVKTDTSVKGTKFGFDIDTVLE
VAQGVVGHPGLSVVGLHMHLGSPILSSQPYSEGSAKAIVLIDALRKQGHPIEYLNMGGGF
GIHYRKQEALPAKAFADVILPAVHQTGCRLVLEPGRFIVGNAGVLISRVVFTKESGGKRF
IIQDAGMNDLIRPTLYDSFHRIWPVQPQAGLPTPPIDFESEIPDTFAQDVVGPVCESGDF
LAKDRRLPLLKRGDLICTFSAGAYGMSMASNYNARVRAAEVLVTGDTARLIRRRETFDDL
IAPEVDCLS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttcaatattgtgatgggcaactctattgcgagaaaataccagttgccgag
ctagcggcgaagtatggaaccccattgttcatttatagtgaagcgacgctccttcatcat
ttgaaggaaattcaatcggcatttgcagcggttaatccggtcatttgttatagtgtgaag
agtaatggaaatctttccattgcgaagctgatggttgatcacggcgcgggctgcgatgtc
acatcagggggtgagttgtatcgtgcgttgaaggctggtacacctgggaatcgaattgtt
tttgccggcgttggcaaatcggacgatgagatgcgcatggcgctcgaggctggggttctc
ctcttcgatgtggaatcggaagcggaactccatgtcctgggagaagttgcgaaatcaatc
ggcaaagtcgctcccgtggcgttgcgagtgaatcctgcattgccgccgaaaacgcacgtg
aaaaccgataccagcgtgaagggcacgaaattcggttttgatattgatactgttctggaa
gttgcgcaaggggtcgttggacatcctggattgtcggttgttggcttgcacatgcatttg
ggatctccgattctcagttcacagccgtattctgaaggttcggccaaagcaatcgtgtta
attgatgcccttcggaaacaaggccacccgatcgagtatctcaatatgggcggcggattc
gggattcattatcgcaaacaggaagcgcttcctgcgaaggcttttgcggatgtgatcctg
cctgcagtgcaccaaactggctgccggttggtgttagaacctgggcggtttattgtgggg
aatgcaggggttctgattagtcgggtagtattcacaaaagaatccggcggaaaacggttt
attattcaagatgccggcatgaatgacctcattcgtccgacattgtacgactcattccat
cgaatttggccggttcagccgcaagctgggctcccgacaccgccaatcgattttgagtcg
gagattcccgatacgttcgctcaagatgtggtcggtccggtatgcgaatcgggcgatttt
ctggcgaaagatcgtcgattgccgttgctcaaacgcggcgatttgatctgcacattcagc
gctggtgcctatgggatgtcgatggcatccaactacaatgcacgggttcgagctgcggaa
gtgctcgtcacaggcgatacagcccgtttgattcgccggcgtgagacgtttgatgactta
attgctcctgaggttgattgcctttcttga
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