Tuwongella immobilis: GMBLW1_16570
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Entry
GMBLW1_16570 CDS
T06428
Name
(GenBank) dna topoisomerase : DNA topoisomerase (ATP-hydrolyzing) OS=uncultured planctomycete GN=HGMM_F22C11C08 PE=4 SV=1: DNA_topoisoIV: DNA_gyraseA_C: DNA_gyraseA_C
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tim
Tuwongella immobilis
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tim03032
]
GMBLW1_16570
03400 DNA repair and recombination proteins [BR:
tim03400
]
GMBLW1_16570
Enzymes [BR:
tim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GMBLW1_16570
DNA replication proteins [BR:
tim03032
]
Prokaryotic type
DNA Topoisomerases
GMBLW1_16570
DNA repair and recombination proteins [BR:
tim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GMBLW1_16570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
VTS00995
UniProt:
A0A6C2YMF4
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All DBs
Position
1:2182012..2184432
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AA seq
806 aa
AA seq
DB search
MAETIQPVSITRETRERYLRYALSVITSRALPDVRDGLKPVQRRILYTMYNDLRLYSDAK
PRKCAKIVGDVTGNYHPHGGAAAYEALVRLAQDWVMLVPLVRGHGNFGSVDGDPPAADRY
TEANLTPIADALMSELKQETVEFRPNYDNTQTEPIVLPAQFPNMLVNGCAGIAVGMATNV
PPHNLAETIKAAVHLIENPEADTPALMKFIKGPDFPLGGKIIADKASLRKIYETGSGSIR
IQGEWKLEDVGRKQFLVITSIPYGVDKGKLESDMGAIIGDRKLPQVLSLSNESNEKDGLR
IAMEIKPGSDPQVILAYFYKHTSLQENFAYNLTCLVPGVDGKLKPEQLGLKPILQHFLTF
RLETVRKRFEFELAALRRRIHILEGFRIVFNALDEAIRIIRGSTGKSDAAEKLIARFQLD
IDQVTAILDAQLYKLATMEIQKILDELAEKQAAAAKIEAILSSETNLWGVVKSEMLALAE
KYGNRRRSKMAGEEDVPEFDPEAYIVRENTNVVLTRDGWIKRVGRLTSVESTRVREGDEV
LAVVPGSTLDHVVFLADDGTAYTMRINEIPVSSGYGEPISKFFKIADQVKIIQALPTDER
FVPTELPPTNPEEPAGPYLLVATAHGYTLRTPFSAFRTASTKSGRKYARLADDDHVVLAQ
VIHGETGLMLAATSGHVIHFPIDSVSILAGVGRGVIGIRMDAGIRCLGGALIGNRHDALV
VETTNGKTIELRRGAHPTINRGGKGTEVVKRSKLQRVVTPPIELPAWDKVDEKPDPKSRE
AERANDKAIDRPRLHSPDATPPDETE
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacgattcaaccggtctccattacccgagaaacccgcgaacgctacttgcgc
tacgccctctccgtcatcacctcgcgggcgttgccggatgtccgtgatggactcaaaccg
gtgcagcgtcggatcttgtatacgatgtacaatgatctgcggctctattcggatgccaag
ccgcggaagtgtgccaagatcgtcggcgacgtgaccgggaactatcacccgcatggcggg
gcggcggcgtatgaggcactcgtgcggttggcccaagattgggtcatgctcgtgccgctg
gtgcggggccatgggaacttcggctcggtggatggcgatccacccgcggccgatcgatac
accgaagccaatctcacgcccatcgccgatgcgctgatgagcgagttgaagcaagaaacg
gtcgaattccgtccgaactacgataatacgcaaaccgaaccgattgtgctgccggcccag
ttcccgaatatgctggtcaacggctgcgcggggattgccgtgggcatggccacgaatgtg
ccgccgcacaatctggcggagacgatcaaggccgcggtgcatctcatcgaaaatcccgag
gccgatacccccgcgttgatgaaattcatcaaagggccggactttccgctgggcggaaag
atcattgcggataaagccagcctgcggaaaatttacgaaacgggcagtggctcgatccgc
attcaaggcgaatggaagctggaagacgttggccgcaagcagtttctggtcatcacgtcg
attccctacggtgtcgacaagggcaagctcgaatcggacatgggggcgatcatcggcgac
cgcaaattgccgcaagttctgagcctgtcgaacgaatcgaacgagaaagacggcctgcgg
attgccatggaaatcaagccggggtctgacccgcaggtgattttggcatatttctacaag
catacatcgctgcaagagaattttgcgtataatctgacctgtttggtgcccggtgtcgat
ggcaaactcaagccggaacagctcggcctgaaaccgattttgcaacactttttgacgttc
cgattggagacggtacgaaagcggtttgagtttgagttggccgcgttgcgtcgccgcatt
catatcctggaaggatttcggattgtcttcaatgcgttggatgaagcaatccgaatcatt
cgcggttccacgggcaaatccgacgccgccgagaaactcatcgcccgcttccaactggac
atcgatcaggtgaccgcgatcctcgatgcccagttgtacaaactggcgacgatggaaatt
caaaagattctcgacgaactcgccgagaaacaagcggcggccgccaaaatcgaagcgatt
ctatcctccgaaacgaatctgtggggcgttgtcaaatcggagatgctggcgttggcggag
aaatacggcaaccgtcgccgctcgaagatggccggggaggaagatgtcccggaattcgat
cccgaagcctacatcgtgcgggaaaataccaacgtcgtgctcacgcgcgatggctggatc
aagcgcgtcgggcggttgacctcagtggaatcgacccgcgtgcgcgaaggcgacgaagtg
ctggcggtggtgcccggaagcacgttggatcatgtcgtgtttctggccgatgatggcacg
gcatataccatgcgcatcaacgaaattccggtgagttcgggatacggcgagccaattagc
aaattcttcaaaatcgccgatcaggtgaagatcatccaagcgttgccgacggatgagcga
tttgtgccaacggagctgccgccgacgaatccggaggaacccgccgggccgtatctcctg
gtggcgacagcacatgggtacacgctgcggactccgttttcggcattccgcacggcctcg
accaagagcggacgaaaatacgcacgattggctgatgatgatcatgtggtgctggctcag
gtcattcatggcgagacgggactgatgctggcggcaacctcggggcatgtgattcatttc
ccgattgattcggtcagtatcttggcgggtgtcggtcgcggcgtcatcggcattcgcatg
gatgccggcatccgctgcctggggggagcgctgattggcaaccggcacgatgcgctggtg
gtcgagacgaccaacggcaagaccatcgaactgcggcgcggtgcccatccgaccatcaac
cgaggcggcaaggggaccgaagtggtcaaacgctccaagttgcagcgggttgtgactcca
cccatcgaactcccggcctgggataaagtcgatgaaaagcccgatccgaaatcgcgggaa
gccgaacgagcgaatgacaaagccatcgaccgacctcggctgcattcgccagacgcgacc
ccgcctgacgaaaccgaataa
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