Tuwongella immobilis: GMBLW1_18440
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Entry
GMBLW1_18440 CDS
T06428
Name
(GenBank) molecular chaperone : 60 kDa chaperonin OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=groL PE=3 SV=1: Cpn60_TCP1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tim
Tuwongella immobilis
Pathway
tim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GMBLW1_18440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tim03019
]
GMBLW1_18440
03110 Chaperones and folding catalysts [BR:
tim03110
]
GMBLW1_18440
03029 Mitochondrial biogenesis [BR:
tim03029
]
GMBLW1_18440
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tim04147
]
GMBLW1_18440
Enzymes [BR:
tim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GMBLW1_18440
Messenger RNA biogenesis [BR:
tim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GMBLW1_18440
Chaperones and folding catalysts [BR:
tim03110
]
Heat shock proteins
HSP60 / Chaperonin
GMBLW1_18440
Mitochondrial biogenesis [BR:
tim03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GMBLW1_18440
Exosome [BR:
tim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GMBLW1_18440
Exosomal proteins of other body fluids (saliva and urine)
GMBLW1_18440
Exosomal proteins of breast cancer cells
GMBLW1_18440
Exosomal proteins of colorectal cancer cells
GMBLW1_18440
Exosomal proteins of bladder cancer cells
GMBLW1_18440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
VTS00434
UniProt:
A0A6C2YL11
LinkDB
All DBs
Position
1:1923292..1924920
Genome browser
AA seq
542 aa
AA seq
DB search
MSAKQIAFDSEAREAMRRGITKLARAVKVTLGPKGRNVIIQKSFGSPTVTKDGVTVAKEV
ELPDVYENMGASMVKEVASKTNDVAGDGTTTATVLAEAIFNEGLRAVVSGANPMLMKRGM
EKAVEQIVAKLKSHSVPVENTAQFNAVATVASNGDSEIGTIIANAMDKVGKDGVITVEEG
KSTKTELEFVEGMSFDRGYLSPYFVTNPETMECELEDPYILVYEKKISSNRDLVPVLEKV
LGQSKPILIICEEVEGEALATLVVNKLRNPSQFRCCAVKAPGYGDRRKAMLEDIAILTGG
RAIFEDLGIQLENVTLKDLGRAKKVKIDKENTVVIEGAGTADAIKARVTMIQRELDKSTS
DYDREKLSERIAKLSGGVAKVNVGGAVESEVKEKKMRVEDALHATRAAAQEGILPGGGVA
LLRASEGLKPEGLTPDEATGFNIVVRACKAPIKQIVDNAGNDGNIVASKVLEKNEFTFGY
DARNDVYVDMVKSGIIDPTKVVRSGLQNAASVATLLLTSDALVADLPKEEKKAGGAGYED
EM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaagcagattgcgttcgattcggaagcccgtgaagcgatgcgccgggggatc
accaagctggcccgcgcggtcaaggtgaccctggggcccaagggccgcaacgtcattatc
caaaagagcttcggttcgccgaccgtgaccaaggacggcgtgacggttgccaaggaagtg
gaattgccggacgtctatgaaaacatgggcgccagcatggtcaaggaagtggcttccaag
accaacgacgttgccggtgacggcaccaccaccgccacggtgctggccgaagccatcttc
aacgaagggttgcgagcggttgtttccggcgccaacccgatgctgatgaagcgcggcatg
gaaaaggccgtcgaacaaatcgttgccaagctcaagagccacagcgttccggtcgaaaac
acggcccaattcaacgccgtcgccaccgttgcttccaacggcgatagcgaaattggcacc
atcatcgccaacgcgatggacaaagtcggcaaagacggcgtcatcaccgtcgaagaaggc
aagtcgaccaagaccgaactggaattcgtcgaagggatgtcgttcgaccgcggctacctg
tcgccgtacttcgtgaccaaccccgaaacgatggaatgcgaactcgaagacccgtacatt
ctggtctacgaaaagaagatttcctcgaatcgcgacctggtgccggtgctggaaaaggtg
ctcggccaaagcaagccgatcctgattatctgcgaagaagtggaaggcgaagcgctggcc
acgctggtggtcaacaagctgcgtaacccctcgcaattccgctgctgcgccgttaaggct
cctggctacggcgaccgccgcaaggccatgctcgaagacatcgccattctgaccggtggc
cgggcgatcttcgaagatctcggcatccaactcgaaaacgtcaccttgaaggatctgggc
cgcgccaagaaggtcaagatcgacaaggaaaacaccgtggtcatcgaaggtgccggcacc
gccgacgccatcaaggcccgcgtgacgatgatccaacgcgaactcgacaagagcaccagc
gactatgaccgcgaaaagctgagcgaacgcatcgccaagctgtccggtggcgtcgccaag
gtcaacgtcggtggcgcggtggaaagcgaagtcaaagaaaagaagatgcgggtcgaagac
gccctgcatgccacccgcgcggcggctcaagaaggcattctccccggtggtggcgtggcg
ctgctgcgtgccagcgaagggctgaagccggaagggctgaccccggatgaagcgaccggc
ttcaacatcgtcgttcgtgcgtgcaaggctccgatcaagcagatcgttgacaacgcgggc
aacgatggcaacatcgtcgcttcgaaggtgctcgaaaagaacgaattcaccttcggctac
gacgctcgcaacgatgtgtacgtcgatatggtcaagtcgggcatcatcgacccgaccaag
gtggttcgcagcggtctgcaaaacgccgccagcgtggccaccctgttgctgaccagcgac
gccctcgtcgccgatctgcccaaggaagaaaagaaggccggcggcgctggctacgaagac
gaaatgtaa
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