Tuwongella immobilis: GMBLW1_18850
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Entry
GMBLW1_18850 CDS
T06428
Name
(GenBank) single-stranded-dna-specific exonuclease : Single-strand DNA-specific exonuclease OS=Planctomyces maris DSM 8797 GN=PM8797T_28899 PE=4 SV=1: DHH: DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tim
Tuwongella immobilis
Pathway
tim03410
Base excision repair
tim03430
Mismatch repair
tim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GMBLW1_18850
03430 Mismatch repair
GMBLW1_18850
03440 Homologous recombination
GMBLW1_18850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tim03400
]
GMBLW1_18850
DNA repair and recombination proteins [BR:
tim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GMBLW1_18850
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GMBLW1_18850
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GMBLW1_18850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
H1_KCTD8_12_16
Motif
Other DBs
NCBI-ProteinID:
VTS00312
UniProt:
A0A6C2YLW3
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All DBs
Position
1:1872345..1874102
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AA seq
585 aa
AA seq
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MPHVAKAWHLKPHDALAIRALSQSMRISPVIAQLLVNRGVTEEADARRFLDAGMNLLHSP
KLMPGMEAAVDRILDAIKDRKKICVYGDYDVDGTTGTAILVQLFQKLQVPIQFYVPNRLG
EGYGLNMDALRNLHAEGVQVIISVDCGIAALEETKLASELGIEMIITDHHEMRDELPGGG
AVLVHPRLPGSLYPWGSLSGSAVAFKLAWALSVRISNHDRVRPELRELLMDSLCLATLGL
VADVVPLQDENRVLVKHGLKRISEQPTVGIRALLESSKLGVEQQLRAEDIAFRIAPRINA
AGRLGCARSVVELLLTQCPDQARELADFLDQRNTQRQQIERRMLEQAQELAERDGEGRPA
LVLSHPDWHAGIIGIVAGKLVDRYGRPVILIAQHDGKPFGTGSARSIPGFEMHTALDACR
DDLIAHGGHAMAAGLKIAADRIDSFRERFCEYAAQHFPQGIPPVPKLSIDAEMPLSSLTI
GLLNDLDRLEPYGADNPRPLFLTGNLQLDGEPRILKDVHLKFFVRSGNSRFAAIGFYMAD
RLDELLSGGGKVCLVYRPKRNVWQGQTNIEMELVDFQPGPDADLA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatgtcgccaaagcctggcatttgaaacctcatgatgccctggcgattcgtgcg
ttgagtcaatcgatgcggatttcccccgtgattgcgcaattgctggtcaatcgcggcgtc
acggaagaggccgacgcccgccgattcttggacgcggggatgaatctgctgcactcgccc
aagttgatgcccggcatggaagcggccgtcgatcgcattctcgatgccatcaaagatcgt
aagaaaatctgcgtctatggcgactacgatgtggacggcaccaccgggaccgccattctc
gtgcagttgttccagaaattgcaggtgcccatccagttttatgtgcccaaccgactgggg
gaggggtacggcctgaatatggacgcgctgcggaatctgcatgccgaaggggtgcaggtc
atcatcagcgtcgattgtggcattgccgccctcgaagagaccaagttggccagcgaactt
ggcatcgaaatgattatcaccgaccaccacgaaatgcgggacgaactgcccggtgggggc
gcggtgctggtccatccgcgattgcccggttcgctgtatccctggggcagtctgtccggc
tcggcggtggcgttcaaactcgcttgggcgctatcggttcgcatctcgaatcatgatcgc
gttcgcccggaattgcgcgaactgctgatggatagcctctgcctggccacgctcggcctg
gtggcggatgtcgtgccgctgcaagacgaaaaccgcgtgttggtcaaacatggcttgaag
cgaatcagcgaacaacccaccgtcggcatccgcgccttgctcgaatcatccaagttgggt
gtggaacagcagttgcgtgcggaagatatcgcctttcggatcgcgccacgcatcaacgcc
gctggtcgattgggctgcgctcgcagtgtcgtggaattgctgctgacgcaatgccccgac
caagcgcgcgagttggccgacttcctcgatcaacgcaacacgcaacggcaacagattgaa
cgtcgcatgctcgaacaggcgcaggaactcgccgaacgcgacggcgaaggccgccccgca
ttggtgttgtcgcacccagattggcacgccggaatcatcggcatcgtcgcgggcaagctc
gtcgatcgctacggtcgccccgtgattctgattgctcagcatgatggcaaaccgtttggc
accggctccgcacgctcgattccgggattcgagatgcacaccgcactcgacgcatgccgc
gacgatctgattgcgcacgggggccacgccatggccgccgggctgaagattgccgccgat
cgcatcgacagcttccgcgagcgcttctgcgaatacgccgcccagcattttccgcagggg
attccgccggttcccaaattgtcgatcgatgccgagatgccgctgtcgagtctgaccatc
ggcctgctcaacgacctggaccgactcgaaccatacggcgcggacaatccccgaccgctg
tttctgaccgggaatctgcaactcgatggcgagccgcggattctcaaagatgtgcacctg
aaattcttcgttcgcagtggcaattcccgattcgccgccattggattctacatggccgat
cgactcgacgaactgctctccggcggcgggaaagtctgtctggtttatcgccccaagcga
aatgtctggcaggggcaaaccaacatcgaaatggaactggtcgatttccagcccggcccc
gatgccgacttagcgtaa
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