Tuwongella immobilis: GMBLW1_27350
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Entry
GMBLW1_27350 CDS
T06428
Name
(GenBank) transcription termination factor : NusA antitermination factor OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_3541 PE=3 SV=1: NusA_N: NusA_N: S1: KH_5
KO
K02600
transcription termination/antitermination protein NusA
Organism
tim
Tuwongella immobilis
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tim03021
]
GMBLW1_27350
03009 Ribosome biogenesis [BR:
tim03009
]
GMBLW1_27350
Transcription machinery [BR:
tim03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GMBLW1_27350
Ribosome biogenesis [BR:
tim03009
]
Prokaryotic type
rRNA transcription factors
GMBLW1_27350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
S1
KH_NusA_C
KH_2
KH_1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
VTR97876
UniProt:
A0A6C2YJE1
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All DBs
Position
1:798752..800260
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AA seq
502 aa
AA seq
DB search
MNSSELLRLVNQMHQEKNIPKEVIFSGIEAAIQVAAERATGNQNDVVVEIDRITGEMRAT
KGGNKIDPELLGRIAAQSAKQLIIQKIREAEGDTVFNEYQRLKGKLVSGLVQRVDSGTAI
VSLGKAEAILPRSEQIPGETHHVNDRVKAVVIEVKRNGPRVKIVLSRNHPDFVRSLFEQD
IPEIQDHTIEIKAVAREPGHRSKIAVSSIDMKVDCVGACVGVRGSRIKNIIEELNNERID
IVRWNDSLQVLIPNALQPAQITEVFTYPRLGRAIVLVTDDQLSLAIGRRGQNVRLASKLI
GWDIEIMTHEELGETLEKAERWFRHLPGISEDGVQTLIEEGFLSYTDVTFLEPAQLGELV
GVDEEAADEMILFAEEMSETIEKEGDPFAPQENAENLESAETGEMESVETDGVAAESTEE
EASEAVAEDASESEMPQTDGELPPEASENSQSDGTGEPESASLHPEDAVESEEPALAESS
EEANESTPTESDSQTEPTTTQS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaacagctcggagttgcttcgcttggtgaatcagatgcaccaagagaagaacatcccc
aaggaagtgatcttcagcgggatcgaggccgccatccaagtggcagccgaacgtgcaacc
ggcaaccaaaatgatgtggtcgtggaaatcgaccgaatcaccggggaaatgcgcgccacc
aagggcggaaataagatcgatcccgagctgctcggtcgaattgctgctcaatctgccaag
caattgattattcagaagatccgcgaagccgaaggcgacacggttttcaacgagtatcaa
cgcctcaaaggaaagttggtctccgggttggtgcaacgggtcgattccggaaccgcgatt
gtctcgctgggcaaggccgaagcgatcctgccgcgatccgagcagatccccggcgaaacc
caccacgtcaacgaccgtgtcaaagcggtggtcatcgaagttaaacgcaatggcccgcgt
gtgaagattgtgctgtcccgcaatcacccggattttgtccggtcgctgttcgagcaagac
attcccgaaattcaagaccacaccatcgaaatcaaggcagtggcccgcgaaccgggacat
cgttccaagatcgcggtttcgtccattgatatgaaggtggactgcgtcggggcgtgtgtc
ggcgttcgcgggagtcggatcaagaatatcatcgaagaattgaacaacgaacggattgat
attgttcgttggaatgattcgctgcaagtgctgattcccaatgcacttcagcccgctcaa
atcacggaagtgtttacctatccgcgattgggccgcgcgattgtgctggtcaccgacgat
caattgtcgctggccatcggtcgccgcgggcagaatgtgcggctggccagcaagctgatc
ggctgggatatcgagattatgacccacgaagagttgggcgaaacgctcgaaaaagccgaa
cggtggttccgacatttgccaggaatttccgaagatggcgtgcaaacgctcatcgaagaa
ggatttttgtcgtatactgatgttaccttcttggaaccggcccaactcggggagctggtg
ggcgtcgatgaagaagccgccgacgagatgatcctcttcgccgaggagatgtccgaaacc
atcgaaaaggaaggcgaccccttcgctccgcaagaaaatgcggaaaatctggaatctgcc
gaaactggcgagatggaatcggtcgaaaccgatggagtggctgccgaatcgaccgaagaa
gaggccagcgaagcggttgcggaagatgcctccgaatcggaaatgcctcagaccgatggg
gaactccccccggaagcatcggaaaattcgcaatcggatggaacgggtgaaccggaatcg
gctagcctgcatcctgaagatgcagtagaatcagaagaacctgcactcgccgagtcgagc
gaggaagccaacgaatcaacccccaccgagtcggactcccaaaccgagccgaccaccact
caatcctaa
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