Tuwongella immobilis: GMBLW1_28000
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Entry
GMBLW1_28000 CDS
T06428
Name
(GenBank) intradiol ring-cleavage dioxygenase : Intradiol ring-cleavage dioxygenase OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_2533 PE=4 SV=1: Dioxygenase_C
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
tim
Tuwongella immobilis
Pathway
tim00362
Benzoate degradation
tim01100
Metabolic pathways
tim01120
Microbial metabolism in diverse environments
tim01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GMBLW1_28000
00624 Polycyclic aromatic hydrocarbon degradation
GMBLW1_28000
Enzymes [BR:
tim01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
GMBLW1_28000
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Motif
Pfam:
Dioxygenase_C
CarboxypepD_reg
RavZ_cat
Motif
Other DBs
NCBI-ProteinID:
VTR97746
UniProt:
A0A6C2YI01
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Position
1:complement(721256..721909)
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AA seq
217 aa
AA seq
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MHAPISRRNFLNGLVLSAAAWQVPGAFAEELTRTPAQTEGPFYPDKLPLDTDNDLIIVND
KLTPAVGTITHLSGKVTTVTGSPIRNALVEIWQVDNNAIYLHSGGGDRKKLDSNFQGFGR
FLTGSTGEYYFRTIKPVPYPGRTPHIHVAVKIKGQPKFTTQCYIKGEPQNERDGIVRSIR
DPKQKAMVVIDFKPVEGSKIGEVAAKFDIVLGMTPAS
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcacgctcccatctcgcgacgaaatttcctcaacggcctggtgctgagtgccgccgcc
tggcaagtccccggcgcatttgccgaggaactcacccgcacccccgcacaaaccgagggg
ccgttctacccggacaaactgccgctggataccgataacgatctcatcatcgtcaacgac
aaactcacccccgccgtgggcaccatcacccacctcagcggcaaggtcacaaccgtcacc
ggctcccccatccgcaatgcgctggtggaaatctggcaagtcgataacaacgccatttac
ttgcacagcggcggcggcgatcgcaaaaaactcgacagcaactttcaagggttcggtcgc
ttcctcaccggctccactggggaatactacttccgcaccatcaagccagtgccctacccc
ggccgcacgccgcacattcacgtggccgtcaaaatcaaggggcaacccaaattcaccacg
caatgctacatcaaaggggaaccgcagaacgagcgcgacggcatcgtccgcagcatccgc
gatcccaagcaaaaagcgatggtggtgatcgatttcaagccggtggaaggctcgaagatt
ggcgaagtcgccgccaagtttgacattgtcctgggcatgacccccgccagctaa
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