Tuwongella immobilis: GMBLW1_37470
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Entry
GMBLW1_37470 CDS
T06428
Name
(GenBank) dna polymerase iii subunit alpha : DNA-directed DNA polymerase OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_1325 PE=4 SV=1: PHP: DNA_pol3_alpha: HHH_6
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tim
Tuwongella immobilis
Pathway
tim03030
DNA replication
tim03430
Mismatch repair
tim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GMBLW1_37470
03430 Mismatch repair
GMBLW1_37470
03440 Homologous recombination
GMBLW1_37470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tim03032
]
GMBLW1_37470
03400 DNA repair and recombination proteins [BR:
tim03400
]
GMBLW1_37470
Enzymes [BR:
tim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GMBLW1_37470
DNA replication proteins [BR:
tim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GMBLW1_37470
DNA repair and recombination proteins [BR:
tim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GMBLW1_37470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DNA_binding_1
DUF6282
Motif
Other DBs
NCBI-ProteinID:
VTS08248
UniProt:
A0A6C2YVC3
LinkDB
All DBs
Position
1:6250003..6253524
Genome browser
AA seq
1173 aa
AA seq
DB search
MSDRRFVHLHCHSHYSLLDGASRIPELVAQVKAQGMNAIALTDHGNLYGAIELYRECTAA
SINPIIGYEAYISPTKRTDRSGKRGDAAYHLTLLAMNETGFKNLVKLSSIAFLEGYYYVP
RIDKELLEAHSEGLFCLSGCLAGEFNEFLVKGETQKAEEVAFWFQKVFQDRYFIEIQNNG
MDIQDACTVEAVRIAERTGVPLVATADAHYLTQEAAAAHDVLICINTGAKRSDEKRLRYG
DNSRFPNPYYVRSPQDMYQLFPGHADAVARSQEIADRVNLKLDFKKRHFPVFHPPEGLTV
EQYFRQLCEEGIRIRYGENPRPEVMARFEHECGIITRMNFSSYFLIVWDFVRFAREQGIP
CSARGSGCGSLVCYVMFLSHVDPLQYDLLFERFLDPNRSEAPDIDIDFCQDRRELVIEYV
KQKYGRESVAQIATFGTMAAKAAIKDVGRVLDIPLERVNYMTKLVPTYLGASIDDALKEA
PDFRKEYDTDPQVREWINIARELEGTNRNAGTHAAGVVIANGPITNYVPVHRVIRKGDDG
NKQGEVVITTQWVMGDIEKVGMLKMDFLGLRTLTLVDHALRMIKKTRGITIDPYQDIPID
DAETYKLLQRGEAKGVFQFESEGIRELLKRMKPDNIRDIIACTALYRPGPLEGGMVDEYI
DCKHGRKQPTYHHPIMEEVLGETFAVMCYQEQVMRLLNRLGGIELSSAYACIKAISKKKQ
EIIDARKGDFIKGASDKGMDPEKAREIFELIEKFGGYGFNKSHSAAYAYVSYHTAYLKRH
YTPEFMAALLSSEIDDGNKRDMLVDHIADARKFGVPVLPPDVNQGESDFTVVDSKIVFGL
TAIKGLGRGAAEEIVRARTEGGPFRDMYDFCDRVDLKIVSRAAIERMIKAGAFDRFANPF
GHRAQIMMVLPRAIQSATERQQDRKRGQRSFFDILDPGSDASGGGSAATEALPEVPYWSN
TEKLMFEKEALDFYLSSHPLAEFDADLRRYTTHECKQLIDLPDGKDVRIGGMITQLRYFT
SKRGNRYARCKIEDFTGSAECVMWSDELERFKDGMVSDRICLAEATVEFGDRSEPVMVLK
KLMSLDQAKKDLTKGLVLKMTLGVHAPEVIEGVARVLRRTPGPCQVYMLIRDGMGKEARL
QLGKQYNVNPAELKTDELEMLLGPGSLIFSGRG
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccgccgctttgtgcatttgcattgccacagccattacagcctactcgacggt
gccagccggattcccgagttggtggcccaggtgaaagcgcaaggcatgaacgcgatcgcc
ttaaccgatcacggcaacctgtacggggccatcgagttataccgcgaatgcaccgccgcc
agcatcaacccgatcatcggctacgaagcctacatttcgcccaccaagcggaccgatcga
tccggcaagcgcggcgatgcggcgtatcacctgacgctgctggcgatgaacgagacggga
tttaagaatctcgtcaaactgtcgtcgatcgcattcttggaaggatattactacgtcccc
cggatcgacaaagaactgttggaagcgcattccgaggggctgttctgcctgtccggatgt
ctggccggggagttcaacgaattcctggtcaaaggcgaaactcagaaggccgaggaagtc
gcgttctggttccagaaagtcttccaagatcgctatttcatcgaaatccagaacaacggc
atggacatccaagacgcctgcacggtggaggcggtgcgcattgccgagcgcacgggggtg
ccactggtcgccacggcggatgcccactatctgacgcaagaagcggcggcggctcatgat
gtgctgatttgcatcaacactggggccaagcgatcggatgagaagcggctgcgatacggg
gataatagccgattcccgaatccgtattatgtccgctccccgcaggacatgtaccagttg
ttccccggccacgccgacgccgtcgcccgatcccaggagattgccgaccgggtcaatttg
aagctcgatttcaagaaacggcacttccccgtattccatccgccggaaggattgaccgtc
gagcaatacttccgccaattgtgcgaagaaggcattcgcattcgctacggcgaaaatccc
cgcccggaagtgatggcccgcttcgagcatgagtgcggcatcatcacccgcatgaacttt
tccagctacttcttgattgtctgggacttcgtgcgattcgcccgcgaacaggggattccc
tgcagcgcgcggggatcgggttgcggctcgctggtctgctatgtgatgtttctgagccac
gtcgatccgttgcagtatgacctgctgttcgagcgattcttggaccccaaccggagcgaa
gccccggatatcgacatcgatttttgccaagaccgccgcgaattggtcatcgaatatgtg
aagcaaaaatacggccgcgagtcggttgcccagattgccaccttcggcacgatggcggcc
aaggcggcgatcaaagacgtgggccgcgtgctggatattccgctggagcgggtgaactac
atgaccaaactggtgcccacctatctgggtgccagcattgacgatgcgctcaaagaagcc
ccggattttcgcaaggaatacgacaccgatccgcaagtgcgggaatggatcaacattgcc
cgcgaattggaaggcaccaaccgcaacgccggcacgcacgccgccggggtggtgatcgcc
aatgggccgattacgaactatgtgcccgttcaccgcgtcatccgcaaaggcgacgacggc
aacaaacagggcgaagtcgtcatcaccacgcaatgggtgatgggcgacatcgaaaaagtc
ggcatgctcaagatggacttcttggggttgcggacgctcacattggtcgatcacgctctg
cggatgattaaaaagacccgcggcatcacgattgatccgtatcaagacattccgattgat
gatgccgaaacgtacaagttgctgcaacggggcgaggcgaaaggggtgttccagttcgaa
tccgaagggattcgggaactgctcaagcggatgaagccggacaacatccgggacatcatc
gcctgtaccgcgctctatcgccccggcccgctggaagggggcatggtcgatgaatacatc
gattgcaaacacggccgcaagcagccaacgtatcaccatccgattatggaagaggtgctc
ggcgaaaccttcgcggtgatgtgctatcaggaacaggtgatgcggctgttgaatcgactc
ggcggcatcgagttgtccagcgcctatgcctgtattaaggccatttccaagaagaaacaa
gaaatcatcgacgcccgaaagggggacttcatcaagggggcctccgataaggggatggac
ccggagaaggcccgcgagattttcgagctgatcgaaaagttcggcggctacggcttcaac
aagtcgcactcggcggcatatgcctatgtctcgtatcacacggcctatctgaagcggcac
tacacgccggaattcatggccgcgctgttgtcttcggaaatcgacgatggcaacaagcgg
gatatgctcgtcgatcacatcgcggacgctcgcaaattcggggtgccggtgctgccaccg
gatgtcaaccaaggcgaatccgacttcacggtcgtggacagcaagatcgtcttcggtctg
accgccatcaagggattgggacgcggcgcggcggaagagattgtccgcgctcgaaccgaa
ggcggcccattccgagacatgtacgatttctgcgatcgcgtcgatctgaagattgtctcc
cgagcagcgattgagcggatgattaaggccggggcgttcgaccgcttcgccaacccgttt
ggccaccgcgcgcaaatcatgatggtgcttccccgtgccattcaatccgccacggaacgg
cagcaagaccgcaaacgaggccaacgctcgttcttcgatattctcgatcccggaagtgac
gccagcggcggcggcagcgcagccaccgaagccctgccggaagtcccgtactggtcgaac
accgaaaagctgatgttcgaaaaggaagcactggatttctacctgtccagtcacccactc
gcggaattcgatgccgatttgcgacgctacaccacccacgagtgcaagcagctcatcgat
ttgcccgatggcaaagatgtccgcatcggcggcatgattacgcagttgcgctacttcacc
agcaagcgtggcaaccgctacgcccgctgcaagatcgaagactttaccggatcggccgag
tgcgtcatgtggtccgatgaactcgaacgattcaaagatggcatggtctccgatcgcatc
tgtctggcggaggcgaccgtcgaattcggcgaccgctccgagccggtgatggtgctgaaa
aagctgatgtcgctggaccaagcgaagaaggatctcaccaaggggctggtgctgaaaatg
acgctgggcgtgcatgctccggaggtgattgagggggtggcgcgggtgctgcggcgcacg
cccggcccctgccaagtctacatgctcatccgcgatggcatgggcaaagaagcgcgactg
caactgggcaagcagtacaatgtcaacccggcggaactcaaaaccgacgagttggaaatg
ctccttggccccggctcgctgatcttttccggacgcggataa
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