Tuwongella immobilis: GMBLW1_38560
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Entry
GMBLW1_38560 CDS
T06428
Name
(GenBank) helicase domain protein : SNF2-like protein OS=Sinorhizobium fredii USDA 257 GN=USDA257_c04330 PE=4 SV=1: SNF2_N: Helicase_C
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
tim
Tuwongella immobilis
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tim03021
]
GMBLW1_38560
Transcription machinery [BR:
tim03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GMBLW1_38560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
RapA_C
Motif
Other DBs
NCBI-ProteinID:
VTS08030
UniProt:
A0A6C2YVD5
LinkDB
All DBs
Position
1:complement(6131172..6134372)
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AA seq
1066 aa
AA seq
DB search
MLGFYVHHPNFKIGKVDKVELAILSVYFFQDGAAKLFEKSAFSEGELTRTYLPLGTRCDA
SGRGCRIDEIKEWIQDRQPVVYLVTTDDGLQLQVNETELVPAEIVRDNPVASLSGLQQEG
YPIFAARSELVDASADVVRQGGGLTALLSSRIDVRPHQAYVAGVVLQDRLRRYILADEVG
LGKTIEAGIVVQDLLSVRPSAKVLVLCPGALTQQWLCEFYTKFSTRVFTLLDLYSTPDRL
SPEQRRTVIAPLHAISGPHRTWLKDAEWDLVIVDEVHHLLVADDAFSFVKALSENVGSIL
LLSALPAQQRKTEFLRLLALLEPERYTGTPPEDFDRLYDAQPEIGRHLRRLRRRLEESPP
DPVEIKEVVSQAIAVHALRGDEVLQSQGNAVLQAEQGVEHAGLRFLKTAADRSRINRRIV
RNRRERLVEDGLLEKTVRKFLPTAYDPGQPEIDAIQSAMRLARKLHGQLDPIVWSAFGRV
LMQSFSHPETAAELLSKLKGVNPGHQRAAPELLGNLAGTRGWVQYLDSLLGAARSWFSDD
DISECIEAVDLWRNSETGLARIDALVELVDKYGGEYKKIVIFAGYPGLVDHLVPPLHEAF
EFESVCEFRSDMSLTEKEASVDRFRKDKEAYFLISDESGGEGRNFQFAGAVVHFDTPWYV
SRIEQRIGRLDRIGHANTEIPVGVLFSRGTVEDDFVKCLADGFKVYERSVSGLEFSLREL
ELGIVTSLLGPERRTADELVSDLCEQVEQERVREENEAVLDEASFNREAAERYRRSNSLA
EAELRLEKAFTEFIWKVAAGKPAREKYDREFPKGIWEFEAGQFQHIKVEFPGQGKPEQTT
TPKGTFRRQIAQARLDLQFFSVGHWFFDGVMNAIHTQQCGRVYAVDVAVPDKPQWFGFEF
VLLAVPDLEPLGGNAGLVSRAMRVFTAQPLHLFVDGAGKVEIDGDALLKLRRELKNEDKD
RTWWNLTKSKAIRVPIPFGGQDGWRRAVQNAHSIAIPEAKRQFEDSIGSEVEMVLLSLTE
QQRQAEQNDSHELEGLKHLELAIRNWRVVVDGTGFLSVNGQLGRGK
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
gtgcttggtttttatgttcaccacccgaattttaaaatcggcaaagtcgacaaagtcgaa
ctggccatcttgtcggtatatttcttccaagatggggcagctaaactcttcgagaaatcg
gcgttttcggaaggtgaacttactcgcacataccttccattgggcactaggtgcgatgcc
tctggtcgcggttgccggattgacgaaatcaaggagtggattcaggaccgacaaccagtt
gtgtacttggttacgactgacgatggtcttcaacttcaggtgaatgaaacggaactcgtt
ccagccgagatcgtcagggataatccggtcgcaagcctttctggacttcaacaagaaggg
tatccgattttcgcggcgcgaagcgaactggtagatgcgtctgccgatgtcgtgcgtcag
ggtggaggactaacggcgctactgtctagccggatcgacgtgcgtccacaccaagcctat
gtggccggggttgtgcttcaggaccgccttcggcgatacatccttgccgacgaagttggg
cttgggaaaacgattgaggccggaatcgttgtccaagatctgttgagcgttcgcccctca
gcaaaagttctcgtcctctgccccggagcgcttacgcagcagtggctctgcgagttttac
acaaagttcagcactcgagtcttcacgctgcttgacctctactccacgcccgacagactt
tcacctgaacagcgacggacagtgattgcgccgcttcatgccatcagcgggccgcacaga
acgtggctaaaggatgccgagtgggacttggtcatagtcgatgaagtgcatcacctgctc
gtagccgacgatgcgttctcgtttgtaaaggctttgtcggagaacgtcggctcaattctg
cttcttagcgccctgccggcgcaacagcgaaagaccgagttccttcggcttctcgctctg
ctcgaacccgaacgatacaccggcactccaccagaggatttcgatcgcctctacgatgca
cagcctgaaatcggtcgccacctgcggcggttgcggcgtcggcttgaagaatcgccacct
gatcctgtcgaaatcaaggaagtggtttctcaggcaatcgcagtgcatgccctccgaggc
gatgaagttcttcagtcgcaaggaaacgcagtccttcaggcagagcaaggagtcgagcac
gcgggtcttaggtttcttaaaactgcggcagatcgttcaagaatcaaccgccgcatcgtg
cggaaccgccgcgagcgactcgttgaagacggtttgcttgagaagaccgtgcggaaattc
ctgccaaccgcttatgaccccggacagccggagattgatgccattcaatctgcgatgcgc
cttgcaagaaaactccacgggcaactcgaccccatcgtctggtcggcttttggccgggtt
ttgatgcagagtttttcgcatccggaaactgcggcagaactgttgtcgaagctcaaagga
gtaaatcccggacatcaaagggctgcacctgaactcttggggaaccttgctggaaccaga
ggttgggtgcaatacctcgattcgcttctgggtgcagcccgttcatggttttctgacgac
gatatttcggagtgcatcgaagcagttgacctttggcgaaactcggaaactggcctagcg
cgcattgatgcgttggtggaactcgttgacaagtatgggggggagtacaagaaaatcgtc
attttcgccgggtatcccggtttggttgatcatctggttccaccacttcacgaagctttc
gagttcgagtcggtttgcgagttccgaagcgacatgagccttacggagaaggaagcaagc
gttgatcgcttccgcaaggataaggaagcgtacttcctaatctctgacgaaagtggtggc
gaaggccgaaacttccagttcgcaggtgccgtcgtccacttcgacacgccctggtatgtg
agccgaatcgagcagcgaatcgggcggcttgaccggattggccatgctaacactgaaatt
cctgttggcgtcctttttagtcgaggcactgtcgaagatgatttcgttaagtgtctcgcg
gatggattcaaggtttatgagcgatcggtgagcggtcttgagttctctcttcgggaactt
gagcttggcattgttacttccctgcttgggccagagcgtcgcaccgcggatgaactcgta
tccgatctttgcgagcaagtcgagcaggaacgggtgcgcgaggaaaacgaggctgtgttg
gatgaagcctcgtttaaccgagaagctgccgagcgataccggcgtagcaattcactggca
gaggcggaactcaggctggagaaggcgtttactgagtttatttggaaggtagcggccggg
aaaccggctcgtgagaagtatgaccgcgaatttccgaaaggcatctgggagtttgaggcg
gggcagtttcagcacataaaggtagagttcccaggacagggaaaacctgagcaaaccaca
acgccgaaggggacatttcggcgacagattgctcaggcgcgattagaccttcagttcttt
tccgtcgggcactggttcttcgatggtgtcatgaacgcaatccacacacagcagtgcggt
cgcgtgtacgcagttgatgtcgctgttcccgacaagccacagtggtttggatttgagttt
gtgttgcttgcagttcccgatcttgaaccgcttggcggaaacgctggccttgtgagccgt
gcgatgcgagttttcacagcgcaaccgcttcacctctttgtcgatggagccggaaaggtt
gagatcgacggcgatgcactcttaaaacttcgccgcgaactcaagaacgaagacaaagat
cgcacctggtggaaccttaccaaatcaaaggcgatacgggtgccgatcccgttcggtggt
caagacggatggcggcgagcggtacagaacgctcactcgattgcgattccggaagcgaag
cgccagttcgaggactccatcgggtctgaagtggaaatggttctcctgtcgctcaccgaa
caacagcggcaagcggagcaaaatgactcacatgagttggagggactcaagcatttagaa
ctagcaattcggaactggcgagtcgttgtcgatggaaccggcttcctctcagtaaatggc
caattggggagggggaaatga
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