KEGG   Tuwongella immobilis: GMBLW1_41920
Entry
GMBLW1_41920      CDS       T06428                                 
Name
(GenBank) dead deah box helicase : DEAD/H associated domain protein OS=Roseiflexus sp. (strain RS-1) GN=RoseRS_3430 PE=4 SV=1: DEAD: Helicase_C: DEAD_assoc
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
tim  Tuwongella immobilis
Brite
KEGG Orthology (KO) [BR:tim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tim03400]
    GMBLW1_41920
Enzymes [BR:tim01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GMBLW1_41920
    5.6.2.6  RNA 3'-5' helicase
     GMBLW1_41920
DNA repair and recombination proteins [BR:tim03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GMBLW1_41920
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: VTS07360
UniProt: A0A6C2YUD4
LinkDB
Position
1:5691171..5693771
AA seq 866 aa
MSDAASATAIGWMEAWFARHGWSPFPFQREVWAAFGAGESGLIHSATGTGKTYAAFLGPV
LESLAELAATGFQPRSPEDPESTESAPRKRSRRKSTASAEPLRVVWLTPLRALAADTQQA
LEAPIAGLGMPWTIGARTGDTSSSLKSRQLERLPTVLVTTPESLCLLLTRPEARQWFASL
RAVICDEWHELLASKRGVQAELALARLRQFSPQLRTWGVSATLGNLETAMHTLLGRIIDA
TTGEEVPRPGRMVRGAADKITRIDSILPKTIERFPWSGHIGLTLLKPVVETIEQGQSALV
FTNTRAQTEIWYQAILDTRPDWAGQIALHHGSLDRKVRDWVENGLRDGSLRCVVCTSSLD
LGVDFSPVDQVVQIGSPKGVARLLQRAGRSGHQPGAVSRITFVPTNALECLEIAATRQAA
AAGKIEGRIPFDQPLDVLAQHLVTVACGEGFFAPEFFAEIRSTHAYRDLSADEFEWVLDF
AMRGGEPLRAYPEFQRITRDSEGRYTVASDGVRRRHRLSLGTIVGDSAILVRYLTGGKLG
SIEESFISRLKVGDRFIFAGKPLELAKLQDATAFVRKAKKSDGAIPRWTGSRMPLSTELA
DAVRDQLQQAKLGKWSSSVELQAMRPILDVQSRWSSIPSEGEFLIERLRNREGWHLFAYP
FAGRLVHEGLASLLAYRLSQLQPISFTIAINDYGMELLAPQAFDWRLETLQQMLQPVRLA
DDILASLNAGEMAKRAFREIARVAGLIVPGMPGSPKSTKQLQASSSLFFQVFVEHDPENL
LLHQARREVLERQLEFVRLRDTLQRLQSSEWTIRDVERPTPLAFPLLVDRIREGISSEKL
ADRVRRMTLELERAADNVPTNALRRS
NT seq 2601 nt   +upstreamnt  +downstreamnt
atgagcgacgccgcgtccgcaaccgccatcggctggatggaggcctggtttgcccgccac
ggctggtcgcccttcccgtttcagcgggaagtctgggccgccttcggcgcgggcgaaagc
gggctgattcactccgccaccggcacaggcaaaacctacgccgccttcctggggccggtg
ttggaatcgctcgcggaactggctgcgaccggattccaacctcgctcgccggaagatccg
gaatcgaccgaatccgcaccacgaaaacgatcccgccgcaaatccaccgcatccgccgaa
ccgctgcgcgtcgtgtggctgacgccgctgcgtgcattggccgccgacacccagcaggca
ttggaagcgcccattgccgggctgggcatgccgtggacaatcggcgctcggactggcgac
accagcagcagcctcaaaagccgccaactggaacgcctgcccacggtgttggtgacgacg
ccggaaagcctctgtttgttgctcacccgtccggaagcccggcaatggtttgcctcactg
cgggccgtgatttgcgatgaatggcacgaattactcgcctcgaaacgcggcgtgcaagcg
gaactcgcactcgcacgattgcgtcaattttccccgcaattgcgcacctggggcgtatcc
gccacgctgggcaatctggaaacggcgatgcacacgctgctgggccgcatcatcgatgcc
accaccggcgaagaggtgccccgtcccggtcgcatggtccgtggcgccgccgacaaaatc
acccgcatcgatagcattttgcccaaaaccatcgagcgattcccctggtccgggcatatc
ggcctgacgctgctcaagccggtggtggaaaccatcgaacagggccaatccgccttggta
ttcacgaatactcgggcgcaaacggaaatctggtatcaggcgattttggatacccgtccg
gactgggcggggcagattgcgctgcatcatggttcgctggatcgcaaggtgcgcgattgg
gtcgaaaatggcctgcgggatggttcgctgcggtgtgtcgtctgcacctcgtcgctggat
ttgggggtcgatttttccccggtggatcaagtcgtgcagatcggttcgcccaagggggtg
gcccgattgttgcagcgtgccgggcgaagcggccaccagcccggcgcggtcagccgcatc
acctttgtccccaccaacgctctggaatgcctggaaatcgcggccactcgtcaagcggcg
gcggcgggcaaaatcgaaggccgcattcccttcgatcaaccgctcgatgtcttggcccag
catttggttacggtggcatgcggcgagggattcttcgccccggaattcttcgcggaaatc
cgcagcacccatgcctaccgcgatctcagcgccgacgaattcgagtgggtcttggatttc
gccatgcgcggcggcgaaccgctgcgagcgtacccggaatttcagcgaatcacccgtgat
tccgaggggcgatacaccgtcgccagcgatggagtccgtcgccgacatcgactcagtttg
ggcaccattgtcggcgattccgccatcttggtgcgctacctcaccggcggcaaactgggc
agcatcgaagagagcttcatctcccggctgaaagtcggcgatcgcttcatttttgccggc
aaaccgctggaattggccaaattgcaagacgcgaccgcattcgtccgcaaggccaaaaaa
tccgacggggcgattccccgctggaccggcagccgcatgccgttgtccaccgagttggcc
gacgccgtccgcgatcaacttcagcaagccaaactggggaaatggagcagttccgtggaa
ttgcaggccatgcggccaattctcgatgtccaatcacgctggtcgagcatccccagcgag
ggggaatttctcatcgaacgcctgcgcaaccgcgaagggtggcacctgttcgcctacccg
tttgccgggcgattggtccacgaggggctggcatcgctgctggcgtaccgattatcgcag
ttgcagcccatcagtttcaccatcgccatcaacgattacggcatggaattgctcgcgccg
caagccttcgattggcgattggaaactctccaacagatgctccagccggtgcgattggcc
gatgatattctcgccagtttgaacgcgggcgaaatggccaaacgcgcctttcgggaaatc
gcgcgggtggccgggctgattgtccccggcatgcccggttcgccaaaatcgaccaaacaa
ttgcaggcatccagttcgttatttttccaggtattcgtcgaacacgacccggaaaatctg
ctgttgcaccaggcgcggcgcgaagtgctggaacggcaattggaattcgtgcgattacgc
gataccctgcaacggctgcaatccagcgagtggacgattcgggatgtcgaacgccccacg
ccgctggcgtttccgctgctggttgaccgcatccgcgaagggatttcttcggagaaactc
gccgatcgggtccgccgcatgaccttggaattggagcgggccgccgacaacgtcccaacg
aacgccttgcgaagatcgtaa

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