Tuwongella immobilis: GMBLW1_42920
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Entry
GMBLW1_42920 CDS
T06428
Name
(GenBank) holliday junction dna helicase : Holliday junction ATP-dependent DNA helicase RuvB OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=ruvB PE=3 SV=1: RuvB_N: RuvB_C
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
tim
Tuwongella immobilis
Pathway
tim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GMBLW1_42920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tim03400
]
GMBLW1_42920
Enzymes [BR:
tim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GMBLW1_42920
DNA repair and recombination proteins [BR:
tim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GMBLW1_42920
RecFOR pathway proteins
GMBLW1_42920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RuvB_C
AAA_lid_4
AAA
AAA_5
Mg_chelatase
TIP49
AAA_14
TsaE
AAA_3
Sigma54_activ_2
Rad17
RNA_helicase
AAA_33
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
VTS07161
UniProt:
A0A6C2YU32
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Position
1:complement(5567976..5569010)
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AA seq
344 aa
AA seq
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MARETVLTQESASEDPKRDAALRPKHLREVIGQQAAVQRLSIAVNASKKLREPLAHILFD
GPPGLGKTTFATVLPTELGVSIQMTSGPALSKPADLLPFLTNLEEGSILFIDEIHRMPRV
VEEFIYPAMEDFRIDIVLGDGMNARTISMNLKRFTLIGATTRSGMLSSPMRDRFRIHEHL
DFYTVPELATIVRVNAQKLGTQISDEAALELAQRSRGTPRIANNRLYWVRHFAASESDGI
ITLPIARAALEMAEVDRDGLDKQDRRYLETLLGVFGGGPAGVEAIAATMNLPADTLSDEI
EPYLLREQFIVRSPRGRIATPRGFTAMGHTPRDLSSPETLPRLF
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgagaccgttctgacccaggaatcggcatccgaagatccgaaacgcgatgcc
gccttacgtcccaagcacttgcgcgaagtcatcggtcagcaagcggcggtgcaacgactc
tccatcgccgtcaatgcgtcgaaaaaactccgtgaaccgctggcgcacattctctttgat
ggcccgccggggttggggaagaccaccttcgccacggtgttgcccacggagttgggtgtg
tcgattcaaatgaccagcggcccggcactctccaagcccgcagatctgctgccatttttg
acaaatctagaagagggttcaatcttatttatcgatgaaattcatcgtatgccgcgggtg
gtggaggagtttatctaccccgcgatggaggattttcgcatcgatattgtgctgggtgat
ggcatgaatgcccgcacgatttccatgaatctcaaacggtttacgttgattggagccacc
acgcgcagcggcatgctttccagtccaatgcgggatcgcttccggattcacgagcacctc
gatttctatacggtgccggaattggcaacgattgttcgtgtgaacgctcaaaaactcggc
acacaaatttcggatgaggctgccttggaattggcccagcggagccgaggcaccccgcgg
attgccaacaatcgtctgtattgggtgcggcattttgcggccagcgaatcggatgggatc
atcacattgccgatcgcccgggcggcgttggagatggccgaagtcgatcgcgatgggttg
gataagcaggatcgtcgctacctggagacgctcttgggagtgtttggtggtggtcccgcc
ggtgtggaagcgattgcggcgacgatgaatctgccagccgatacactttccgatgaaatc
gagccgtatctgctgcgggagcaattcattgtgcggtcgccgcgtggccgaatcgccacc
ccgcgaggcttcaccgccatggggcataccccccgcgatttgagcagccccgaaaccctg
ccgcggctgttttga
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