Tuwongella immobilis: GMBLW1_51860
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Entry
GMBLW1_51860 CDS
T06428
Name
(GenBank) trna pseudouridine synthase d : tRNA pseudouridine synthase D TruD OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_1776 PE=4 SV=1: TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tim
Tuwongella immobilis
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tim03016
]
GMBLW1_51860
Enzymes [BR:
tim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GMBLW1_51860
Transfer RNA biogenesis [BR:
tim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GMBLW1_51860
Prokaryotic type
GMBLW1_51860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
VTS05381
UniProt:
A0A6C2YRM0
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All DBs
Position
1:4374500..4375681
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AA seq
393 aa
AA seq
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MKIKQSPDDFIVEELTTLTPLSDGPFGLYRLRKTGWTTPDALNLVCRRWKLPWQRLSYGG
LKDRHAMTTQYFTVANGPARGINQQNILVEYLGRAAEPYDSSFIKANRFRLVVRDLRDDE
TNAAQAKATAIRHVGIPNYFDDQRFGSVSAAGHFIARHLVLGDFESGLKQALTSAYAFDR
AEAKREKAILRQHWRDWPTCKSKLDRGNARSVIDYLVTHPDDFRGAFGRIRPELGELYLS
AYQSHLWNRTLAGWIRSKVSGSSLGSIELRTGPLPVPQSVPAPLLPDWFGLNIPLPSARM
TWDAEASWAPAMQSVLNAEGITLEQMKLKGLRRPYFSKGERAAVYRPEGFSLIADDDDRN
FGERKLTLQFELPRGSYATMLVKCLLGTSEGLD
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaagcaatcccccgacgatttcatcgtcgaagaactcaccaccctcactccg
ctctcggatggcccattcggcctgtaccgccttcgcaagaccggctggacgacgcccgat
gcgctcaatctcgtctgccgacgctggaagctcccctggcagcgactctcctacggcggg
ctgaaagatcgccatgcgatgaccacgcagtatttcaccgtcgccaacgggccggctcgc
ggcatcaatcagcagaatatcctcgtcgagtatctcggtcgggccgccgagccgtatgat
tcctcgttcatcaaggcgaatcgctttcgcttggtggtgcgggatctccgagatgatgag
acgaacgccgcgcaagccaaggcgacggcgattcggcatgttggcatcccgaactacttt
gacgatcagcggttcggttcggtctccgccgccgggcatttcatcgcgcggcatttggta
ctgggcgatttcgaatccgggctgaagcaagcgctcacgtcggcttatgcctttgatcgt
gccgaggcgaagcgcgaaaaggcgattctccgacagcattggcgcgattggccgacctgc
aaaagcaagctggatcgtggcaacgctcgcagtgtcatcgattatttggtgacgcatccg
gatgattttcgcggggcattcggtcggattcgcccggaactcggcgagttgtatctgtct
gcgtatcaaagccacctgtggaatcgcacgttggccggctggattcgctccaaggtgtct
ggcagcagtttgggcagcattgagctgcgaaccgggccgctgccggtgccgcaatcggtg
cccgcgccgctgttgcctgattggtttgggctgaatatcccgctgccgtccgcgcgaatg
acctgggatgcagaggcgagttgggcacccgccatgcaatcggtgctgaacgcggaagga
atcacgctcgaacaaatgaagctgaaggggctgcgtcgcccgtatttctccaagggggaa
cgcgcagccgtctatcggcccgaagggttctccctcatcgcggatgatgatgatcggaat
ttcggcgaacgcaagttgacgctgcaattcgagttaccccgaggcagctacgccaccatg
ctcgtgaagtgtctgctgggcacctccgaaggcttggattga
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