Thiomicrolovo immobilis: WCX72_02185
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Entry
WCX72_02185 CDS
T11235
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm03030
DNA replication
timm03430
Mismatch repair
timm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WCX72_02185
03430 Mismatch repair
WCX72_02185
03440 Homologous recombination
WCX72_02185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
timm03032
]
WCX72_02185
03400 DNA repair and recombination proteins [BR:
timm03400
]
WCX72_02185
Enzymes [BR:
timm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WCX72_02185
DNA replication proteins [BR:
timm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WCX72_02185
DNA repair and recombination proteins [BR:
timm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WCX72_02185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF7708
Motif
Other DBs
NCBI-ProteinID:
XAU05807
LinkDB
All DBs
Position
complement(423138..423929)
Genome browser
AA seq
263 aa
AA seq
DB search
MIEASQLPQKLCEGLTAYQIEQLTGENAELAVELMRAQGLELVSRDGTRYYPHSCDQLLS
AATFCIVDIETNGSKPDKHQIIEIGAVKVQNLHIIDRFESLVRCDHISGHITEITGIAEE
DTQDAPGLREVLSDFKQFLGNDIFVGHDVKFDFQFTSKMMERVGMAPLLNRTLCTIDLAE
RTISSYRYGLAFLNEQLELYKEATHHRALSDAMTTAKLFKRTLKCIPTEIQTVEELITFS
KKAKRLKRPKFPPQPPEQTTPEA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagcctcccaactcccccaaaagctctgcgaagggctcaccgcctaccagatc
gaacagctgaccggcgaaaacgccgaactggccgtcgagctgatgcgtgcccaggggctc
gaactcgtcagccgggacggcacacgctactatccccatagctgcgaccagctcctctcg
gcggcgaccttctgcatcgtcgacatcgaaaccaacggctccaaacccgacaaacaccag
atcatcgaaatcggcgccgtcaaggtgcagaaccttcacattatcgaccgcttcgagagc
ctggtacgatgcgaccatatctcggggcacatcaccgagatcaccggcatcgcggaggaa
gacacccaggatgcgcctggtctgcgagaagtactgtcggatttcaaacagttcctgggc
aacgacatcttcgtcggccacgacgtcaagttcgacttccagttcacctcgaagatgatg
gagcgcgtcgggatggcgcccctgctcaaccgcaccctctgcaccatcgacctcgccgag
cgcaccatcagctcctaccgctacggcctcgccttcctgaacgaacagctcgagctctac
aaagaggcgacccaccaccgcgccctctccgacgcgatgacgacggcaaagctcttcaaa
cgcaccctcaaatgcatcccaaccgagatccagaccgtcgaggagctcatcaccttctcc
aagaaggccaaacgcctcaaacgcccaaaattcccgccccagcccccggaacagacaact
cccgaagcctaa
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