Thiomicrolovo immobilis: WCX72_02330
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Entry
WCX72_02330 CDS
T11235
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm03420
Nucleotide excision repair
timm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WCX72_02330
03430 Mismatch repair
WCX72_02330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
timm03400
]
WCX72_02330
Enzymes [BR:
timm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WCX72_02330
DNA repair and recombination proteins [BR:
timm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WCX72_02330
MMR (mismatch excision repair)
Other MMR factors
WCX72_02330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
eIF3_p135
AAA_11
CarD_TRCF_RID
ResIII
Motif
Other DBs
NCBI-ProteinID:
XAU05835
LinkDB
All DBs
Position
448323..450371
Genome browser
AA seq
682 aa
AA seq
DB search
MEQIFKNLNEQQAEAVKKIDGPLLILAGAGSGKTTTITSRLAYLLDVVGIPASNTLTLTF
TNKAAKEMRERALSMIDAKSYPPLLCTFHKFGLLFLKFHIHRLGRENNFVVIDTDDKKRI
LKKLAGDLPMPLVASEISRYKNSLITPEEAHAQAEQKNYEQIAKVYKEYEAYLVENNLVD
FDDLIALTYKLLDEHPELAEETSKRYQYIMIDEYQDTNELQFKLLQKLCSAHNNLCVVGD
DDQSIYGWRGAHVRNILEFDQDFQDAMVVKLEHNYRSRTPILTVANALIEHNRSRLGKTL
LPTRGDGDAVKMLSSNDENEEASKISLQINKLIGEGVRPNEIAVLYRINALSRSLEEGLN
RAGIPYKLVGGLRFYDRAEIKDLISYLRVITNHHDNFSMKRIINKPKRGIGKASIDKLEL
AAMEQERSLYDLIRLSSTAELEALVRKKNTTTLKQFIGELEQMRAIADESLYSFAERLDE
IFKIKAFYEAMPDGTERVQNIDEFFGLFRDFIKQNPEASLDAFLNEVSLQSEQDQVEGES
IYIMSIHASKGLEFEHLFIIGLEEGFLPLVGDGSDLEEERRLGYVSFTRAKDTLTLSHVQ
SRYYKGRRTELEKSRFFGEAGLCESSLKIEKNTAFKKGDLVRHKIFGAGRVIGVSKAGRE
FKLNINFGGNKREILASFVERL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaattttcaaaaaccttaacgagcagcaggccgaagccgtcaagaagatcgat
ggtcccttattgatccttgcgggcgcgggcagcggcaaaacgacgaccattacttcgcgg
cttgcctacctgctggacgttgtcgggatcccggcgagcaacacgctgacgctgaccttt
accaacaaagcggccaaggagatgcgtgaacgcgccctctccatgatcgacgcgaaaagc
tatccgccgctgctgtgtactttccacaagttcggcctgctctttttgaagttccatatc
caccggctggggcgggagaacaacttcgtcgttatcgatacggacgacaagaagcggatt
ttgaaaaagctcgccggcgacctcccgatgcccctcgtggccagcgagatctcccgctac
aaaaactccctgatcacgccggaagaggcgcatgcccaggcggagcagaaaaactacgaa
cagatcgccaaagtgtacaaggagtacgaggcgtaccttgtcgagaacaacctggtggac
ttcgacgacctgatcgccctgacgtacaaactgctcgatgaacacccggagctggccgaa
gagacgagcaagcgctaccagtacatcatgatcgacgagtaccaggatacgaacgaactg
cagttcaagctgctccagaagctctgcagcgcccacaacaacctctgcgtggtcggggac
gacgaccagagcatctacggctggcgcggggcgcacgtgcgcaatatcctggagttcgac
caggacttccaggacgctatggtggtcaaactcgaacacaactaccgttcgcgcacgccg
attctgaccgtggccaacgcgctgatcgagcataaccgctcccgcctgggcaagacgctg
ctgccgaccagaggcgacggggatgccgtcaagatgctctcttcgaacgacgaaaacgag
gaggcgagcaagatctccctgcagatcaacaaactgatcggcgagggggtacgccccaac
gagatcgccgtgctctaccgcatcaatgcgctcagccgctccctcgaggaggggctcaac
cgcgccgggatcccctacaagctcgtcggcgggctgcgcttttacgaccgtgccgagatc
aaggacctgatcagctacctgcgcgtcatcaccaaccaccacgacaacttctcgatgaaa
cgcatcatcaacaagcccaagcggggcatcggcaaggcgtccatcgacaagctggagctg
gcggccatggagcaggagcgctccctgtacgatcttatccgcctcagcagtacggccgag
ctcgaggccctggtgcgcaagaaaaacacgacgaccctcaaacagttcatcggcgagctg
gagcagatgcgcgcgatcgcggacgagtcgctctacagcttcgccgagcgtcttgacgag
atcttcaagatcaaggccttttacgaggcgatgcccgacggaaccgagcgggtgcagaat
atcgacgagttcttcgggcttttccgcgactttatcaagcagaacccggaggcgagcctg
gatgcgtttttgaacgaggtttccctgcagagcgagcaggaccaggttgaaggggagagc
atctacatcatgagcatccacgcctccaaggggctggagttcgaacacctcttcatcatc
ggcctcgaagaggggttcctcccccttgtcggggacggcagcgacctggaggaggagcgc
cgcctgggctacgtctcctttacgcgcgccaaagatacgctgacgctgtcacacgtgcag
agccgctactacaagggacgccgtacggaactggagaagagccgcttcttcggcgaggcg
gggctgtgcgaaagctcgctgaagatcgagaagaacacggcattcaaaaaaggggacctc
gtccgccacaagatcttcggtgccgggcgggtcataggcgtgagcaaggccggacgcgaa
ttcaagctcaacatcaacttcggcggcaacaagcgggagatcctcgcctccttcgtggag
cgcctctga
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