Thiomicrolovo immobilis: WCX72_02390
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Entry
WCX72_02390 CDS
T11235
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm02024
Quorum sensing
timm03060
Protein export
timm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
WCX72_02390 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
WCX72_02390 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WCX72_02390 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
timm02044
]
WCX72_02390 (ffh)
Enzymes [BR:
timm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
WCX72_02390 (ffh)
Secretion system [BR:
timm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
WCX72_02390 (ffh)
Eukaryotic Sec-SRP protein
WCX72_02390 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
AAA_31
Zeta_toxin
cobW
AAA_30
Helicase_RecD
AAA_19
SLFN-g3_helicase
GTP_EFTU
ResIII
AAA_16
APS_kinase
KTI12
AAA_33
T2SSE
Fe-ADH
ATPase
ATPase_2
NACHT
AAA_18
AAA_17
nSTAND3
AAA_24
AAA_14
Thymidylate_kin
NPHP3_N
6PF2K
Fe-ADH_2
KAP_NTPase
AAA_2
ABC_tran
AAA_28
SWI2_SNF2
RMI1_C
AAA
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
XAU05847
LinkDB
All DBs
Position
complement(457437..458783)
Genome browser
AA seq
448 aa
AA seq
DB search
MFDTLTDSFTSAIKKIRFHDDEKALKKALAELKKALLKADVHHKVVKELIDRVELDTKKA
GIGKDQFLDAMRFTLHDLLKTEGHQGFVFAANPPTVILMTGLQGSGKTTTTGKLATYLKE
QKKKKVLIVAADLQRMAAVEQLRQITEQIGVDLYEDEATKNPVEVVTAAMAKAKSNLYDV
VLVDTAGRLAIDEELMSELGQVRDAAKPSEIFYVADSMTGQDAVRTAQSFKEQIGIDGVI
LSKYDGDAKGGVALGIASQVQVPLRFIGAGEKMADLEVFLPDRIVNRLMGLGDIEGLAEK
ASSVIDEKQAKKLTQKIKKGQFNFNDFLEQMESMKKLGSMKSLMGMIPGMGDMSKALKDF
DLENSQELKQIKALVSSMTPKERENPDLLNNSRKQRLAKGAGMDQMDVNRILKQFKNAAK
MAKKFSGKKGMQDLQNMMSQMQGGKFPR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgataccctgacggattcgtttacgtccgccattaaaaagatccgcttccatgac
gatgaaaaggcgctgaagaaagcgcttgccgaactgaaaaaagcgctgctcaaagccgat
gtccatcacaaggttgtcaaagagcttatcgaccgcgtcgaactggatacgaagaaagcc
ggcatcggcaaggatcagttccttgacgcgatgcgcttcaccctgcacgacctgctgaaa
accgaagggcaccaggggtttgtttttgccgccaatccccccaccgtcatcctgatgacc
ggtcttcagggttcgggaaaaacaacgacaacggggaaactcgccacctacctcaaagag
cagaaaaagaagaaggtcctgatcgtcgcggcggacctgcaacgtatggccgccgtcgaa
cagctccgccagattacggagcagatcggcgtcgacctgtatgaagacgaggccaccaag
aacccggtcgaggtcgtcacggcggccatggccaaagccaagagcaacctgtacgacgtc
gtgctcgtcgacaccgccgggcgcctggccatcgacgaagagctgatgagcgagctgggg
caggtccgcgacgccgcgaagccgagcgagatcttctacgtcgccgactccatgacgggc
caggatgccgtccgcaccgcccagagcttcaaagagcagatcgggatcgacggggtcatc
ctgagcaagtacgacggtgacgccaaaggcggcgtcgcgctcggcatcgcctctcaggtt
caggtgccgctgcgctttatcggtgccggtgagaagatggcggacctcgaagtcttcctc
cccgaccgtatcgtcaaccgcctgatggggctgggggacatcgaagggctggcggagaag
gcctcaagcgttatcgatgagaagcaggcgaaaaagctgacccagaagatcaagaaggga
cagttcaacttcaacgacttcctcgagcagatggagagcatgaaaaagctcggctccatg
aaatccctgatgggcatgatcccggggatgggggacatgtccaaggcgctcaaagacttc
gacctggagaactcccaggagctcaaacagatcaaggcgctggtcagctccatgaccccc
aaagagcgcgaaaaccccgacctgctcaacaacagccgcaagcagcgcctggccaaaggg
gccgggatggaccagatggacgtcaaccgcatcctcaagcagttcaaaaacgccgcgaag
atggccaagaaattctccggcaaaaaagggatgcaggatctgcagaacatgatgagccag
atgcagggcggcaagttcccgcgctga
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