Thiomicrolovo immobilis: WCX72_02845
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Entry
WCX72_02845 CDS
T11235
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
timm Thiomicrolovo immobilis
Pathway
timm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WCX72_02845 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
timm03400
]
WCX72_02845 (uvrB)
DNA repair and recombination proteins [BR:
timm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WCX72_02845 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WCX72_02845 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
T2SSE
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
XAU05932
LinkDB
All DBs
Position
complement(553137..555110)
Genome browser
AA seq
657 aa
AA seq
DB search
MGRFEVVTEYAPAGDQPGAIDTLSKSVLQGHRYQTLEGVTGSGKTYTMAKVIEKTQLPTI
IMTHNKTLAAQLYSEFKAFFPNNHVEYFISYYDYYQPEAYIPRQDLFIEKDSSINDELER
LRLSATANLLSYDDVIVIASVSANYGLGDPEEYAKMVQILEVGQEIGQKELLLRLVEMGY
SRNDTYFDSGHLRVSGDVLDIYPPYLEDEAIRVEFFGDEIEAIYTFEVIANKKLEEKEKV
TVYATSQFTVGQEKLSRAVKTIEDELGERLDNLLANEKIVEAQRLKQRTEFDLEMLETVG
MCKGIENYSRHLTAKKPGEAPYTLLDYFSINHDKYMIIVDESHVSLPQFRGMYAGDRSRK
EVLVEYGFRLPSALDNRPLKYEEFINKAPHYLFVSATPAEVELELSAVKAEQIIRPTGLL
DPQIVIKDSDNQVEDLHDEIKKTVEKGDRILVTVLTKKMAESLTTYLADLGIQVQYMHSD
IDAIERNQIIRSLRLGEFDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTI
GRAARNAEGRVVLYAKKTTRSMKAAIDTTTQRREKQMAYNEAHGITPTTVKRKLDENLKL
EETGELYNKRKKMEKMPAAERKKILAELNQKMKEAAKKLEFEEAARLRDEIAKIRQL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggtagatttgaagtcgtcaccgagtatgcaccggcaggagaccagcccggagcgatt
gacaccctctccaagagcgtcctccaggggcaccgttaccagacccttgaaggggtaacc
ggcagcggaaagacctatacgatggccaaggtcattgaaaagacccagcttccgacgatc
atcatgacccataacaaaaccctcgccgctcagctctacagtgaattcaaggccttcttt
cccaacaaccacgtcgaatacttcatcagctactacgactactatcagcccgaagcctac
attccgcgccaggacctctttattgaaaaggacagttccatcaacgacgagctcgaacgc
ctccgcctatcggccacagccaatctgctcagctacgacgacgtcatcgtcatcgcttcc
gtctccgccaactacggtctgggggatccggaggagtacgccaagatggtccagatcctc
gaggtcggacaggagatcgggcagaaggagctgctcttgcggctcgtcgaaatgggctac
agccgcaacgacacctacttcgacagcggtcacctgcgcgtcagcggcgacgtacttgac
atctatccgccctacctcgaggacgaggcgatccgggtggagttcttcggcgacgagatc
gaagccatctacaccttcgaggtgatcgccaacaaaaagctcgaggagaaagagaaggtc
accgtctatgccacaagccagttcaccgtcgggcaggagaagctctcccgggcggtgaag
acgatcgaggatgaactcggcgagcggctggacaatctgctcgccaacgaaaagatcgtc
gaggcgcagcgattgaagcagcgcaccgagttcgacctggagatgctggagaccgtcggc
atgtgcaagggaatcgagaactactcccgccacctcaccgcaaaaaagccgggcgaagcc
ccctacaccctgctggactacttctcaatcaaccatgacaagtatatgatcatcgtcgac
gagtcccacgtctccctgccacagttccgcgggatgtacgccggcgaccgcagccgcaaa
gaggtgctcgtcgaatacggcttccgtctccccagcgccctggacaaccggccgctcaag
tacgaggaatttatcaacaaagcgccccactaccttttcgtctccgccacccctgccgaa
gtagaactggagctcagcgccgtcaaagccgagcagatcatccgcccgacggggctgctt
gatccgcagatcgtcatcaaggattcggacaaccaggtcgaagacctccacgacgagatc
aaaaagaccgtcgagaagggcgaccgtattctcgtcacggtgctgaccaagaagatggcc
gagtcgctcaccacctacctggccgacctcggcatccaggtgcagtacatgcactccgat
atcgatgccatcgaacgcaaccagatcatccgcagcctgcggctgggggagtttgacgtt
ctcatagggatcaaccttctgcgcgaggggctggacctgccggaggtgagcctcgtcgcc
atccttgacgccgacaaagagggcttcctgcgctcggaaacctccctgatccagaccatc
ggccgcgcggcgcggaatgccgaagggcgcgtcgtcctctacgccaagaagaccacgcgt
tccatgaaggccgccatcgacaccacgacccagcgccgcgaaaaacagatggcctacaac
gaggctcacggcatcacgccgacgaccgtcaaacgcaagctcgacgaaaacctaaagctc
gaagagacgggcgaactctacaacaaacgcaagaaaatggagaagatgccggccgccgaa
cgtaaaaagatcctggccgaactgaaccagaagatgaaagaagcagccaagaagctggag
tttgaagaggcagcacgtctacgcgacgagatcgccaagatccggcagctctaa
DBGET
integrated database retrieval system
