Thiomicrolovo immobilis: WCX72_03760
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Entry
WCX72_03760 CDS
T11235
Name
(GenBank) HNH endonuclease
KO
K03555
DNA mismatch repair protein MutS
Organism
timm Thiomicrolovo immobilis
Pathway
timm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
WCX72_03760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
timm03400
]
WCX72_03760
DNA repair and recombination proteins [BR:
timm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
WCX72_03760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
DUF968
HNHc_6
HNH_2
MutS_II
AAA_21
AAA_16
AAA_29
Motif
Other DBs
NCBI-ProteinID:
XAU06111
LinkDB
All DBs
Position
736332..739406
Genome browser
AA seq
1024 aa
AA seq
DB search
MLHSEIDAVLNSKDRLLTEVYFDLQRRFEEKYGSDTVVFMEIGTFYEVYEVNNDDMQVGK
AKEMAELLNIQLTKKNKNIPENSVKNPFLAGVPSVSFERYLNRLIQEQRYTIIVIRQKGV
PPKLSRYIGQIISPGTNFDHTVDNDDNYIVSLLIDRHREIYSVGYAAIDVTTGKTWLYET
YGTSEDPTYALDEIFNLLNIYRTTEVVLTFLEGVENQKEVIRYLEISEHYAYSVNHERPK
IDYQNELFQNVYQIQSLLSPIEHLDLERHPFVSEALSSLVHFVIEHDYHIIQKLARPKMI
DNTRYMYLGNNALEQLAVLSKDRSDMTLLKLIDKSVTAIGKRLLKERLLNPIQERGELER
RYGLIDRVMPHVRMLGDALRGVYDLERLHRRIALARLHPFEMNYVHASLVGIRELMEFVK
RHKLIKTPFSEQEVDTFIRDIEQSIDLEVSRRFTVSTVDDNFLRRGVDVQVDALVDENAR
MLQHFAIIMDAMERMLGEQGAAAGSGGYVSLGVLDKEGHYISMSRTRWAMIEKEFASGSV
DLGGETVCFSDFSVKRLTNSVKITSELTEQLSDKIMRNQAKIVALVKERFITLQRTFERR
YTLLFERIIGYVADLDVAVASARAAQQYNFACPTIVDVHGDENFLQLMALRHPLIEIQER
QGVYVPNDIVMGNRSYMDLPYPETVMLDPAVHDGHEVNGVLLYGINSSGKSSLMKSIGLA
VLMAQAGFYVPASSMKFSLFESLFTRIVSRDNLQKGLSTFAVEMMELKNIFNRAGTRSLI
LGDEISHGTETLSGVAIVASAIMKLAKLRSIFLFATHLHQLASMEEMRRLENVVDLHLSV
EYDEALDRLIFNRVLQPGSGSSVYGLEFARSLHMDQEFLEAANRIRKRLSNDFDELELLV
KKRTSKYNKDLFVTTCVICGAKAEDVHHIAHQASADTRGFIGHMPVNHRHNLIPLCRDHH
REIHEGKLVVKGFVMTSNGLELDVEAQLAKPAVVAEEVPEINEAEVPEPQPEAPGKASID
MDDF
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
gtgctacacagcgagattgatgcagttctcaacagcaaagaccgcctgctgaccgaggtc
tattttgacctgcagcgccgtttcgaggagaaatacggcagcgatacggtcgtctttatg
gagatcggtaccttctacgaagtctacgaggtcaacaatgacgacatgcaggtgggcaag
gccaaggagatggcggagctgctcaatatccagctgaccaagaagaacaagaacatcccc
gagaacagcgtcaagaaccccttccttgcgggcgtgccctccgtctcttttgagcgctac
ctgaatcgcctgatccaggaacagcgctacacgatcatcgtcatccgccagaagggggta
ccgccgaaactcagccgctatatcggacagatcatctccccgggtacgaacttcgaccac
accgtcgacaacgacgacaactacatcgtctccctgctgatcgaccgccacagggagatt
tacagtgtcggctacgcggcgatagacgtcacaacgggcaagacctggctctacgagacc
tacgggacaagcgaagaccccacctatgccctggacgagatattcaacctgcttaacatc
taccgcaccacggaagtggtgctgaccttcctggagggggtggaaaaccagaaagaagtg
attcgttacctcgagatcagcgagcactacgcctacagcgtcaaccacgagcgccccaag
atcgactaccagaacgagctgttccagaacgtctaccagatccagtccctgctgtcgccc
atcgagcacttggacctggagcgccaccctttcgtctccgaggcgctctcatcgctggtg
cacttcgtcatcgaacacgactaccacatcatccagaagctcgcccgtccgaagatgatc
gacaacacgcgctacatgtacctcggcaacaacgccctggagcagctggccgttctctcc
aaagaccgcagcgacatgacgctgctcaaactcatcgacaagagcgtcacggccatcggc
aagcgcctgctgaaagagcgcctgctcaaccccatccaggaacgcggcgaacttgagcgc
cgctacggcctgatagaccgggtaatgccgcacgtgcggatgctcggcgacgccctgcgg
ggggtctacgacctcgaacgcctgcaccgccggatcgcgctggcgcgcctacaccccttt
gagatgaactatgtccacgcgtcgctcgtcggcatccgtgaactgatggagttcgtcaaa
cggcacaagctcatcaagacccccttcagcgaacaggaggtcgatacctttatccgcgat
atcgagcagagcatcgacctggaggtgtcgcgccgcttcaccgtcagcaccgtcgacgac
aacttcctgcgccgcggcgtcgacgtgcaggtggatgcgctggtggacgaaaatgcccgt
atgctgcagcacttcgcgatcatcatggacgcgatggagcggatgctcggtgaacagggg
gcggctgcgggcagcggcggctacgtctccctgggcgtcctggacaaagaggggcactac
atctccatgagccgcacccgctgggcgatgatcgaaaaggagttcgcctccggcagcgtc
gacctggggggcgaaaccgtctgtttcagcgacttcagcgtcaagcggctcaccaacagc
gtcaagatcacctcggagctgaccgaacagctctctgacaagattatgcgcaaccaggcg
aagatcgtcgccctggtcaaggagcgcttcattacgctccagcgcaccttcgagcgccgc
tatacgcttctgttcgagcggatcatcggctacgtggccgacctcgacgtcgccgtcgcc
tccgcgcgggcggcgcagcagtacaacttcgcctgcccgaccatcgtcgacgtgcacggg
gacgagaacttcctgcagctcatggcgctgcgccacccgctcatcgagatccaggagcgg
cagggggtctacgtccccaatgacatcgtcatgggcaatcgcagttacatggacctgcct
tatcccgagaccgtgatgctcgatcccgccgtgcatgacgggcacgaggttaacggggtg
ctgctttacggcatcaactccagcgggaaatcctcgttgatgaagagcatcgggttggcc
gtcttgatggcccaggcgggcttttacgtgccggcgtcgtcgatgaagttctcccttttc
gagtcgctctttacccggatcgtctcccgcgacaacctgcaaaaggggctctccaccttc
gccgtcgagatgatggaactaaagaacatcttcaaccgcgccgggacacggtcgctgatc
ctcggcgacgagatctcccacggcaccgaaacgctttccggcgtcgccattgtcgccagc
gcgattatgaagctggcgaagctgcgctccatttttctctttgcgacccacctgcatcaa
ctggcgtcgatggaggagatgcgtcggctggagaacgtcgtcgacctgcacctgagcgtg
gagtacgacgaggcgcttgaccgtctgatcttcaaccgggtgctgcagccgggcagcggc
tcgagcgtctacgggttggagtttgcgcgctccctgcatatggaccaggagttcctggag
gcggcgaaccgcatccgcaagcgcctctccaacgacttcgacgaactggagctgctggtc
aaaaaacgcaccagcaagtacaacaaggacctctttgtcaccacctgcgtcatctgcggg
gcgaaggcggaggatgtgcaccatatcgcccaccaggccagtgcggacacccgcggcttc
atcggccatatgcccgtcaaccaccgccacaatctcatccccctctgccgggatcaccac
cgggagatccatgagggaaaactcgtcgtcaaaggcttcgtcatgacctccaacggtctg
gaacttgacgtcgaggctcagttggccaaaccggccgttgtcgccgaggaagtaccggag
atcaacgaagccgaagtaccggaaccgcagcccgaagcaccgggaaaagcctccatcgat
atggatgatttttaa
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integrated database retrieval system
