Thiomicrolovo immobilis: WCX72_04315
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Entry
WCX72_04315 CDS
T11235
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
timm Thiomicrolovo immobilis
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
timm03009
]
WCX72_04315
Enzymes [BR:
timm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
WCX72_04315
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
WCX72_04315
Ribosome biogenesis [BR:
timm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
WCX72_04315
23S rRNA modification factors
WCX72_04315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_11
SYY_C-terminal
Methyltransf_12
Methyltransf_23
Methyltransf_31
Methyltransf_PK
TyrRSs_C
Motif
Other DBs
NCBI-ProteinID:
XAU06220
LinkDB
All DBs
Position
838112..838819
Genome browser
AA seq
235 aa
AA seq
DB search
MRLDHYLVEAGLAPTRSKAQQLVKSGSVTVDGSVVTKPAFAVESQQVEVTEAMPYVSRAA
LKLKGFLPSLPFDVMGMSALDIGASTGGFTQVLLEAGAAAVDAVDVGRDQLHPDIKADPR
VRSFEQTDIRRFMPDRTYDVVTSDVSFISLHHILDDVERLAGRWIVLLFKPQFEVGREAA
RDRKGVVTDPAAVAKAMADFEAACAARGWQQRAKAPAAITGKEGNSETCYCFEKG
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcttgaccactatctcgtcgaagcggggctggcgccgacacgctcgaaagcgcag
cagttggtcaaatccgggagcgtcaccgtcgacggcagcgtggtgaccaagccggcattc
gccgtcgagtcccagcaggtggaggtgaccgaggcgatgccctacgtcagccgcgcggcg
ctgaagctcaaagggttcctgccgtcgctgccctttgacgtcatgggaatgagcgccctc
gatatcggtgcctcgacggggggcttcacccaggtgctgctcgaagcgggcgcggcagcg
gtcgatgccgtcgacgtcggccgggatcagctccatcccgacatcaaggcggatccgagg
gtgcggagcttcgaacagactgatatccgccgtttcatgccggaccggacgtatgatgtc
gtcaccagcgacgtctcctttatctccctgcaccatatcctcgatgacgtggagcgtctg
gcggggcgctggatcgtgctgctgttcaaaccgcagttcgaggtcggacgcgaagcggcc
cgggacaggaagggggttgtgacagacccggcggccgtggcgaaggcgatggctgatttc
gaagcggcctgtgcggcgcggggctggcagcagcgcgcgaaagcgcctgccgcgattacg
ggcaaggaggggaacagtgaaacatgctactgctttgaaaaaggttga
DBGET
integrated database retrieval system
