KEGG   Thiomicrolovo immobilis: WCX72_06040
Entry
WCX72_06040       CDS       T11235                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
timm  Thiomicrolovo immobilis
Brite
KEGG Orthology (KO) [BR:timm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:timm03016]
    WCX72_06040 (truD)
Enzymes [BR:timm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     WCX72_06040 (truD)
Transfer RNA biogenesis [BR:timm03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    WCX72_06040 (truD)
 Prokaryotic type
    WCX72_06040 (truD)
SSDB
Motif
Pfam: TruD Ig_ZP2_3rd
Other DBs
NCBI-ProteinID: XAU06556
LinkDB
Position
1174351..1175439
AA seq 362 aa
MDRFYYLQHAPIPFVFKQSVRDFVVNEIPLYPFTGNGEHLILHVRKKNLSTWDLISLLAK
YLGIKGKEIGYAGLKDKNAMTTQYISLPKKFEKKLEGFSHENVKILEKTYHKNKIHMGHL
KGNRFFIRLKKVTPTAAKKIDEALKQIAAYGMPNFFGYQRFGIGGENWKKGEALLRGKIK
ERNVKLKRLYINAYQSHLFNLWLSRRIEVSTLIGNFDAKEISPLLNIPEDQLQKLAQQPH
PYKLIEGDVMMHYPHGRPFEFDGDAEDIERFNERDIVPTGLLVGKRAKRSTGLSRDFEKA
YDAVHEIDGQRRYAWVFPEEVEGKYREEEAWYELHFTLPKGSYATVLIEEIAKRKIDNDE
EA
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggaccgtttctactacctgcagcatgcaccgattcccttcgttttcaaacagagcgta
cgcgactttgtcgtcaacgaaattccgctttacccttttacgggcaacggcgaacacctc
atcttgcatgtgcgcaaaaagaacctctccacctgggacctcatctccctgctggcgaag
tacctcggcatcaaaggcaaggagatcgggtacgccggtctcaaagacaagaacgcgatg
acgacgcagtacatctcgctgccgaagaagtttgagaagaaactggaggggttcagccac
gagaacgtgaagattctcgagaagacctaccacaagaacaagatccacatgggacacctc
aaggggaaccgcttttttatccgtctcaagaaggtgacaccgacggcggccaagaagatc
gacgaggcgctgaaacagatcgccgcctacggcatgccgaactttttcggttatcagcgg
ttcggcatcggcggggagaactggaagaagggtgaggccctgctgcgcggaaagatcaag
gagcgcaacgtcaagctgaaacggctttatattaatgcatatcaaagccacctcttcaac
ctctggctgagccgccgcatcgaggtgagtacgctgatcggcaactttgatgccaaagag
atatcgccgctgctcaacatccccgaagatcagctgcaaaagctggcgcagcagccgcac
ccctacaagctcatcgagggggacgtcatgatgcactacccgcacggccgccctttcgaa
ttcgacggtgatgcggaggatatcgaacgcttcaacgagcgcgacattgttccgacgggc
ctgctggtcggcaaacgggccaaacgctccacggggctctcccgggacttcgaaaaggcg
tatgacgccgtccacgagatcgacggtcagcgccgttatgcctgggtttttcccgaagag
gttgagggcaaataccgtgaggaggaagcctggtacgaactgcactttacgctccccaaa
ggctcctacgcgaccgtactgatcgaagagatcgccaaacgcaaaattgataacgacgag
gaagcatga

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