Thiomicrolovo immobilis: WCX72_06260
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Entry
WCX72_06260 CDS
T11235
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
WCX72_06260 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
timm01007
]
WCX72_06260 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
timm03016
]
WCX72_06260 (aspS)
03029 Mitochondrial biogenesis [BR:
timm03029
]
WCX72_06260 (aspS)
Enzymes [BR:
timm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
WCX72_06260 (aspS)
Amino acid related enzymes [BR:
timm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
WCX72_06260 (aspS)
Transfer RNA biogenesis [BR:
timm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
WCX72_06260 (aspS)
Prokaryotic type
Other AARSs
WCX72_06260 (aspS)
Mitochondrial biogenesis [BR:
timm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
WCX72_06260 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
DUF4443
Motif
Other DBs
NCBI-ProteinID:
XAU06599
LinkDB
All DBs
Position
complement(1219437..1221197)
Genome browser
AA seq
586 aa
AA seq
DB search
MRSHYCTDLNENNVGERVELAGWANSYRDHGGIIFIDLRDKTGLIQLVCDPADNAEAHQI
ANDVRDEFVLIAKGTIRLRGEGLTNPRLKTGAIEVVVDELVIENRSAPMPFVIGDENVGE
ETKLKYRYLDLRSTSSFDTFRLRSKAAIAARNVLDELGFLEVETPILTKSTPEGARDYLV
PSRVHEGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQPEFTQIDVEMSF
CDQEEVIAVAEKLIVGMFKAAGHDVQAPFPRMPHSEAMERYGSDKPDMRYGLEMVDVIDI
FERCDNEIFTAIAKNPKLNRIKALRVPGADLVFSKREMKSFEDYVRKFGAKGLGYFQMKE
DGLKGPLTKFFSDEDIQAIIDRTELEVGDVVFFGAGDKHTVWDYMGRFRIFIAEHEKMNL
VDKDRFEFLWVVDFPMFEIDEGRVKALHHPFTMPKDLNHEHVEDIESIAYDIVLNGVELG
GGSIRIHKQDVQEEIFKLLGIEEEEAQEKFGFLLDALKFGAPPHGGFAIGFDRLIMLLAK
KDSIRDVIAFPKTQKASCLLTQAPSSVDNAQLRELHIRTRESKSQS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
ttgagaagccattactgtaccgatttaaacgaaaacaacgtcggcgagcgcgtcgaactc
gccggctgggcgaacagttaccgtgaccacggcggcatcatctttatcgacctgcgtgac
aaaaccggactgatccagctcgtctgcgacccggcggataacgccgaagcgcaccagatc
gccaacgacgtccgcgacgagttcgtcctgatagccaaagggaccatccgtctgcgcggc
gaagggctgacgaacccgcgcctcaaaacgggggccatcgaggtcgtcgtcgatgaactc
gtcatcgagaaccgctccgccccgatgccgtttgtcatcggcgacgagaacgtcggcgaa
gagaccaagctcaagtaccgctacctcgacctgcgttccacttcctcgtttgacaccttc
agactgcgctccaaagcggccatcgcggcacgcaacgtcctcgacgagctcggtttcctc
gaagtagagacaccgattctgacgaaatccaccccggaaggtgcgcgcgactacctcgta
cccagccgtgtccacgaaggcgagttctacgccctgccgcagtccccgcagctcttcaag
cagctcctgatggtcggcggcttcgaccgctacttccagatcgcgaaatgtttccgtgac
gaagacctccgcgccgaccgccagccggaatttacccagatcgacgtcgagatgagcttc
tgcgaccaggaagaggtcattgccgtcgccgaaaagctgatcgtcggcatgttcaaagcc
gccggccatgacgtgcaggcccctttcccgcgcatgccgcacagtgaagcgatggagagg
tacggttccgacaagcccgacatgcgctacggcctggagatggtcgacgtcatcgacatc
ttcgagcgctgcgacaacgagatcttcaccgccatcgcgaagaacccgaaactcaaccgc
atcaaggcgctccgcgttccgggcgccgacctcgtcttctccaagcgcgagatgaaaagt
ttcgaggattacgtccgcaaattcggcgcgaagggtcttggctacttccagatgaaagag
gacggcctcaagggaccgctgacgaagttcttctcagacgaagatatccaggcgatcatc
gaccgtaccgagcttgaagtcggcgacgtcgtcttcttcggcgccggcgacaagcacacc
gtctgggactacatggggcgcttccgtatctttatcgccgagcatgagaagatgaacctc
gtcgacaaagaccgtttcgaattcctctgggtcgtcgacttcccgatgttcgagatcgac
gaaggacgcgtcaaagccctgcaccaccccttcacgatgcctaaagaccttaaccacgag
cacgtcgaagacatcgaatccatcgcctacgacatcgtcctcaacggtgtcgagctgggc
ggcggttccatccgtatccacaagcaggatgtccaggaggagatcttcaaactcctcggc
atcgaggaggaggaagcccaggagaaattcggtttcctcctcgacgctctcaagttcggt
gcgccgccgcacggcggtttcgcgatcggtttcgaccgcctcatcatgctgctcgccaaa
aaggacagcatccgcgacgtcatcgccttcccgaaaacccagaaggcctcctgtctgctt
acccaggctccgagcagcgtcgacaacgcccagctgcgtgaactgcatatccgcaccaga
gaatccaaaagccagtcatga
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