Thiomicrolovo immobilis: WCX72_06330
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Entry
WCX72_06330 CDS
T11235
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm00550
Peptidoglycan biosynthesis
timm01100
Metabolic pathways
timm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
WCX72_06330 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
WCX72_06330 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
timm01011
]
WCX72_06330 (mrdA)
Enzymes [BR:
timm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
WCX72_06330 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
timm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
WCX72_06330 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
XAU06612
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All DBs
Position
1231154..1232938
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AA seq
594 aa
AA seq
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MRTRFLIALFIFIWVSLLSRVYYLSVHSNRYYEQLSMENTLKTERIAPVRGEILDRNFKP
LAINKLGFKIEIMPHLNTQRRIESLQTTLERIQQLLPMLDAQKMIKIYKQNDSHYNHREI
AVADFISYEDILPVYSELNLLENVKISPAPMRYYPYQKIAAHLIGYTAKSNQQEIEKDPV
LKLTGIVGKSGLEKEYNTYLEGIPGERTVQMNALNEEISVLETRKAVENRNLVLTIDMRL
QQYISELMRGNAGAVVVMGLDGEILSAGSYPEYNPNTFVSGISAKKWNALINDLDMPFTN
KIVNGLYPPGSTIKPSIGLVYLDSGISQWWYVTCSGTMKLGNRNFRCWKSWGHGKTDLHK
AIRESCDDYFYKGSLKVGIEKISDGLKNFGLGNKTGIDLPNEFIGTIPNRAWKRERYNEP
WYIGETLNTSIGQGSVLVTPLQIAQNTALLAGGKLPRPRLARMIDNNLTKAVYRDVLTPA
QKADLPIIRRAMRQVCSHPKGTASSQIKTTVPIAGKTGTAQVVGIPQATKKRIKEEDMAY
YTRSHAWLTTYGPYKHPKYVVTALIEHGGHGASAAGDIVSKIYDKLVEFGYIKK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
gtgagaacccgtttcctcatcgccctgttcatttttatctgggtctcgctgctcagccgc
gtctactatctgagcgtgcactccaaccgttattatgagcagctttccatggagaacaca
ctcaaaacggagcgcatcgcgccggtccgcggcgagatacttgaccggaatttcaagcct
ctcgccatcaacaagctgggcttcaagatcgagatcatgccccatctgaacacccagcgg
cggatcgagagtcttcagacgacgctggagcggatccagcagctgctgccgatgctcgat
gcgcaaaagatgatcaagatctacaagcagaacgattcgcactacaaccaccgcgagatc
gccgtggccgactttatctcatacgaggacattctgcccgtctattccgagctgaacctg
cttgaaaacgtcaagatctccccggcgccgatgcgctattacccctaccagaagatcgcg
gcgcatctcatcggctatacggcgaaatccaaccagcaggagatcgagaaggaccccgtg
ctcaaactgacgggcatcgtcgggaaatcgggcctggagaaagagtacaacacctacctc
gaggggattccgggggagcgcacggtgcagatgaacgcgctcaacgaggagatctccgtg
ctcgaaacccgcaaggcggtggagaaccggaacctggtgctcaccatcgacatgcggctg
cagcagtacatcagcgaactgatgcgcgggaatgcgggggccgtggtcgtgatgggcctt
gacggcgagatcctctcggcgggaagctaccccgaatacaaccccaataccttcgtctcg
gggatctcggcaaagaaatggaacgcactgatcaacgacctcgatatgccctttacgaac
aagatcgtcaacgggctctatccgccgggctctaccatcaaaccctccatcgggcttgtc
tatctcgacagcgggatcagccagtggtggtacgtcacctgcagcggtacgatgaagctg
gggaaccggaatttccgctgctggaaaagctgggggcacggcaagaccgacctgcacaag
gcgatccgggagagctgtgacgactacttctacaaagggagcctcaaggtcgggattgaa
aagatcagcgacgggttgaaaaacttcggcctgggcaacaaaacggggatagaccttccc
aacgagttcattggcaccatccccaaccgggcgtggaaacgggagcgctacaacgagccg
tggtatatcggcgagacgctcaacacctccatcgggcaggggagtgtgctcgtcacgccc
ctgcagatcgcccagaacacggcgctcctcgccggcgggaaactgccccggccgcggctg
gcgcgcatgatcgacaataacctgaccaaagcggtctaccgggatgtcctgacccctgcg
caaaaagcggaccttcccattatccgccgggcgatgcgccaggtctgcagccatcccaaa
gggacggcgtcctcccagatcaaaaccacggtgcccatcgcgggcaagaccgggaccgcc
caggtggtcgggatcccgcaggcgacgaagaaacggatcaaagaggaggatatggcctac
tatacgcgctcgcacgcctggttgacgacctacgggccctacaagcatcccaaatacgtc
gtcaccgccctgattgaacacggcggccacggggccagcgccgccggcgacatcgtctcg
aagatctatgacaaactggtggagttcgggtatatcaaaaaatag
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