Thiomicrolovo immobilis: WCX72_06380
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Entry
WCX72_06380 CDS
T11235
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
timm Thiomicrolovo immobilis
Pathway
timm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WCX72_06380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
timm02000
]
WCX72_06380
Transporters [BR:
timm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
WCX72_06380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
XAU06621
LinkDB
All DBs
Position
complement(1240660..1241793)
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AA seq
377 aa
AA seq
DB search
MDRRTFLTAAAATSSAVLLEGCNDSNRVAIDYSKHPKQHDTTDKSVNINRGKKTELKIAT
SWPAHFPIMGTGVDRFADRVAQISGGQLSIKLFPKNTLVPALAVFDAASSGQIDGFHSGP
YYWKGKNAAFSLFSGFPFGMTAEELNGWILYGGGMELWRELYGRYNLHPFAGGNTNIQMG
GWFRKPIETLEDMNGLKMRIPGLGGEVMSKLGVNPVLLPAGEIYTSLERGVIDATEWVGP
YLDTKMGFYKVAPYYYSGWHEPGSILEMTFSKHTWERLSGEQQAIIECAVSELNSTMTFE
FQAKNAEAMASLEANGVKLMRFPDAVTEAAKKALTAVIAEQSAQSADFKRVFESASSYLA
KSKVFSDASLRYFLNVR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggatagacgtacttttctgactgctgcggcggcgacatcgtcggcggtgctgctcgag
ggctgcaacgacagtaatcgggtggcgatcgactacagcaaacatccgaaacagcacgat
acgacagacaaaagcgtcaacatcaaccgcggcaaaaagacggagctcaagatcgcgacg
agctggccggcgcactttcccatcatgggcacgggcgtcgaccgtttcgccgatcgggtc
gcgcagatcagcggcgggcagctcagtatcaagctcttcccgaaaaacaccctcgtcccc
gccctcgccgtttttgatgcggccagcagcggccagatcgacgggttccactcgggcccc
tactactggaagggcaaaaacgcggccttctccctcttcagcgggttcccgtttgggatg
acggcggaggagcttaacggctggattctctacggcggcggcatggagctgtggcgggag
ctctacggccgctacaacctccacccttttgccggcggcaataccaatatccagatgggc
ggctggtttcgaaaaccgatcgagaccctggaggatatgaatggcctgaagatgcgcatc
ccggggctcggcggcgaagtgatgtcgaagctcggcgtcaaccccgtcctgctgcccgcc
ggggagatctacacctccctggagcgcggcgtgatcgatgcgacagagtgggtcggcccc
tacctcgacacgaagatgggcttttacaaggtagcgccctactactactcgggatggcac
gaaccgggttccatcctggagatgaccttcagcaaacatacgtgggagcggctctcggga
gaacagcaggctatcatcgagtgtgctgtcagcgagctcaacagcacgatgaccttcgaa
ttccaggcgaagaacgccgaggcgatggcttcgctcgaagcgaacggcgtcaagctgatg
cgcttccccgacgccgtcaccgaggccgctaaaaaagcgctgacagcggttatcgccgaa
cagagcgcccagagcgccgacttcaaacgggtttttgagagcgcctcctcctatcttgcc
aaaagcaaggtcttcagcgacgccagcctgcgctacttcctcaacgtccgctaa
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