Thiomicrolovo immobilis: WCX72_06535
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Entry
WCX72_06535 CDS
T11235
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm00020
Citrate cycle (TCA cycle)
timm00480
Glutathione metabolism
timm00720
Other carbon fixation pathways
timm01100
Metabolic pathways
timm01110
Biosynthesis of secondary metabolites
timm01120
Microbial metabolism in diverse environments
timm01200
Carbon metabolism
timm01210
2-Oxocarboxylic acid metabolism
timm01230
Biosynthesis of amino acids
timm04146
Peroxisome
Module
timm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
timm_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
timm_M00173
Reductive citrate cycle (Arnon-Buchanan cycle)
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
WCX72_06535
09102 Energy metabolism
00720 Other carbon fixation pathways
WCX72_06535
09106 Metabolism of other amino acids
00480 Glutathione metabolism
WCX72_06535
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
WCX72_06535
Enzymes [BR:
timm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
WCX72_06535
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GFIT
Motif
Pfam:
IDH
GrpB
DUF5114
Motif
Other DBs
NCBI-ProteinID:
XAU04161
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All DBs
Position
complement(1267560..1269734)
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AA seq
724 aa
AA seq
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MSKIIWSKIDEAPALATYSFFPIASKFCAEGGVELEQSDISLAGRVLAAMGKGEDELSKL
GELVLKPEGNIIKLPNISASVGQLKDCIAELQEQGYDIPNYPENPANEEEKALQATYSTC
LGSAVNPVLREGNSDRRAAKAVKNYAQKNPHRLKAYSDNSKSYVAHMNGNGDFYGNEKSI
TMEKGQKVTIALNGNELKTIDALDGEVLDGTFMSVKALRAFYKQTIEDAKAKGVIWSVHL
KATMMKISDPIMFGHGFEIFFEDVFAKYADTFKEVGVNPNLGMSDLEKKIKGHAKEAEIK
AAFQAVVEADSPKIAMVDSDKGTTNFNAPNDIIIDASMPVVVREGGKQWDRNGDALECVA
VIPDSTYGMFHEEMVADCVKNGQYDVTTMGTMQNVGLMAQKAEEYGSHPTTFELAEAGTV
TVTAEDGTLLMSFECEAGDIWRMSRAKDIPIKDWIRLAFERGQIEQIPVVFWLDENRAHD
AQMIAKVKKYMPEFNTDGLEIHFMDIAAATRFTNERIRAGKDTIAVTGNVLRDHLTDMYP
ILELGTSAKMLSIVPLLAGGGLFETGAGGSAPKHVDQFLAEGHLRWDSLGEFLALAESLR
MIEQKYPNAKLAEVTAALDVANQEYLDNNKAPGRKAGEPDNKASHFYVAQYWATALADSA
DKELQAKFTPVAKALKENEAKIMEELMAAEGKAQDIGGYYHPDDAKAEAAMRPSATLNAI
IDAL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaatcatctggtcgaaaattgacgaagctccggctttggctacatactcgttc
tttccgattgcttccaaattctgcgctgagggcggcgttgaactggaacaaagcgatatc
tcacttgccggtcgtgtccttgccgcgatgggtaaaggtgaagatgaactctcaaaactg
ggcgagcttgttctgaagcctgaaggtaacattattaagctgccgaacatctctgcatcc
gttggtcagctcaaagactgtatcgccgagctccaggaacagggttacgatatcccgaac
taccctgaaaatccggcgaacgaagaagagaaagcgctccaggcgacgtacagcacctgc
ctcggttccgcggtaaacccggttcttcgcgaaggcaactccgaccgccgtgcggcgaaa
gccgtcaagaactatgcgcagaagaacccgcaccgcctcaaagcgtactccgataactca
aaatcctatgtcgcgcacatgaacggcaacggtgacttctacggcaacgagaagtccatc
acaatggaaaaaggccagaaagtcacgatcgccctcaacggcaacgaactcaaaacaatc
gatgcgcttgacggcgaagtgctcgacggtactttcatgtccgtcaaagcactccgcgcg
ttctacaagcagacgatcgaggacgcgaaagcgaaaggcgtcatctggtcggtccacctc
aaagcgacgatgatgaagatctccgacccgatcatgttcggtcacggtttcgaaatcttc
ttcgaagacgtcttcgcgaaatacgcggacaccttcaaagaggtcggcgtcaacccgaac
ctcggtatgtccgaccttgagaagaagatcaagggtcacgcgaaagaggcggaaatcaaa
gcggcattccaggcggttgtcgaagcggacagcccgaaaatcgcgatggtcgactctgac
aagggtacgacgaacttcaacgcgccgaacgatatcatcatcgatgcctctatgccggtt
gtcgtccgtgaaggcggcaagcagtgggatcgtaacggtgacgcgctcgagtgtgtcgcg
gttatcccggactccacgtacggtatgttccacgaagagatggtcgctgactgtgtcaaa
aacggacagtacgacgtcacgacaatgggaacgatgcagaacgtcggcctgatggcacag
aaggcggaagagtacggctcccacccgacaacgttcgagctcgcggaagcgggtacggtc
acggtcacggcggaagacggcacgcttctgatgagctttgagtgtgaagcgggcgacatc
tggcgtatgtcccgcgcgaaagacatcccgatcaaagactggatccgcctcgcgttcgaa
cgcggtcagatcgagcagatcccggtcgttttctggctggacgaaaaccgtgcgcacgat
gcgcagatgatcgccaaagtcaaaaaatatatgccggagttcaatacggacggtctggag
attcactttatggacatcgccgctgcgacacgcttcacgaacgagcgtatccgtgcgggt
aaagacacgatcgccgttaccggtaacgttctgcgtgaccacctcaccgacatgtacccg
atcctcgagctcggtacgtcggcgaaaatgctctccatcgttccgctgctcgcgggcggc
gggctgttcgagaccggtgcgggcggttcggcgccgaagcacgtcgaccagttcctggca
gagggtcacctccgttgggactccctgggtgaattcctcgccctggccgagtctctgcgc
atgatcgagcagaagtacccgaacgccaaactggctgaagtgactgctgcccttgacgtt
gcgaaccaggagtaccttgacaacaacaaggctcctggccgtaaagcgggcgagccggac
aacaaagcgtcccacttctatgtcgcccagtactgggcaacggcgctggcggattctgca
gacaaagagctgcaggcaaaattcacgccggtcgcgaaagcgctcaaagagaacgaagcg
aagatcatggaagagctgatggctgcggaaggcaaagcacaggatatcggcgggtactac
cacccggacgatgcgaaagcggaagcggcaatgcgcccgtctgccacgctcaacgcgatt
atcgacgcgctctaa
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