Thiomicrolovo immobilis: WCX72_06780
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Entry
WCX72_06780 CDS
T11235
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm00260
Glycine, serine and threonine metabolism
timm00460
Cyanoamino acid metabolism
timm00630
Glyoxylate and dicarboxylate metabolism
timm00670
One carbon pool by folate
timm00680
Methane metabolism
timm01100
Metabolic pathways
timm01110
Biosynthesis of secondary metabolites
timm01120
Microbial metabolism in diverse environments
timm01200
Carbon metabolism
timm01230
Biosynthesis of amino acids
timm01240
Biosynthesis of cofactors
timm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
WCX72_06780
09102 Energy metabolism
00680 Methane metabolism
WCX72_06780
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
WCX72_06780
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
WCX72_06780
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
WCX72_06780
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
WCX72_06780
Enzymes [BR:
timm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
WCX72_06780
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
XAU04208
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Position
1322827..1324074
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AA seq
415 aa
AA seq
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MSFLQEFDNEVYALCEKELERQTDHLEMIASENFTLPAVMEAMGSVFTNKYAEGYPQKRY
YGGCEFADAVEQLAIDRACELFGCKFANVQPHAGSQANGAVYAALIKAGDKILGMDLSHG
GHLTHGAKPSFSGKNYQSFTYGVELDGRINYERVMDIARIVQPKIIVCGASAYAREIDFK
KFREIADEVGAILFADIAHIAGLVAAGEHPSPFPYADVVTTTTHKTLAGPRGGLIMTNDE
EIAKKINSAIFPGLQGGPLVHVIAAKAVGFKYNLSEEWKAYAKQVKSNASVLAEVIMKRG
YKVVSDGTDNHLVLVSFLDRDFSGKDADAALGRAGITVNKNTVPGEFRSPFVTSGIRIGS
PALTSRGMKEEQFEIIANRICDVLDDIENEAKQAEIKEELKALAQQFVIYSQPTY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagctttctgcaagagtttgacaacgaagtctatgccctgtgtgaaaaagagctggag
cgtcagaccgaccaccttgagatgatcgcttccgaaaactttaccctgccggccgtcatg
gaggcgatgggttccgtgtttacgaacaaatatgccgagggttacccgcaaaaacgctat
tacggcggttgtgaattcgccgatgccgtcgagcagctggccatcgaccgcgcctgcgaa
ctcttcggctgtaaattcgccaacgtccagccccacgccggttcccaggcgaacggcgcc
gtctacgccgcgctgatcaaagccggcgacaagatcctcggtatggacctgagccacggc
ggtcacctgacccacggcgccaagccgagcttctcgggcaagaactaccagagcttcacc
tacggtgtcgaactcgacggccgcatcaactacgagcgcgtcatggatatcgcccgcatc
gtccagccgaagatcatcgtctgcggcgcttccgcctatgcccgtgagatcgacttcaag
aagtttagagagatcgccgacgaagtcggtgcgatcctctttgcggacatcgcccatatc
gccggcctcgttgccgccggtgagcacccgagcccgttcccgtacgcggacgttgtcacg
acgacgacgcacaagaccctcgccggtccgcgcggcggtctcatcatgaccaacgatgaa
gagatcgcgaagaagatcaactccgcgatcttcccgggcctgcagggcggaccgctggtc
cacgtcatcgccgccaaagccgtcggcttcaaatacaacctctccgaagagtggaaagcc
tacgcaaagcaggttaagtccaatgcgagcgtcctcgccgaggtcatcatgaaacgcggc
tacaaggtcgtcagcgacggtacggacaaccacctcgtcctcgtctctttcctggaccgc
gacttcagcggtaaagacgccgacgcggcgctgggccgcgcgggcatcaccgtcaacaaa
aataccgtcccgggcgaattccgctcgccctttgtcacttccggtatccgtatcggttcg
ccggcacttacgtcgcgcggcatgaaagaggagcagttcgagatcatcgccaaccgcatc
tgcgacgtccttgatgatatcgagaacgaagccaagcaggccgagatcaaagaagagctc
aaagcactcgcccagcagttcgtcatctactcccagccgacgtattga
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