Thiomicrolovo immobilis: WCX72_07025
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Entry
WCX72_07025 CDS
T11235
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
timm Thiomicrolovo immobilis
Pathway
timm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
WCX72_07025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
timm02000
]
WCX72_07025
02044 Secretion system [BR:
timm02044
]
WCX72_07025
Transporters [BR:
timm02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
WCX72_07025
Secretion system [BR:
timm02044
]
Type I secretion system
Adhesin protein transporter
WCX72_07025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_29
nSTAND3
AAA_23
AAA_16
FtsK_SpoIIIE
TsaE
AAA_22
AAA_18
Motif
Other DBs
NCBI-ProteinID:
XAU04257
LinkDB
All DBs
Position
complement(1368915..1371068)
Genome browser
AA seq
717 aa
AA seq
DB search
MGEQNRSGLLDALLAVAKLYHQEVTAEIVLAGLPVDPEDPKLFEPDPQRSRSLFSRAAEK
AGFSSTLQKKSLRKIAQHLLPCILILKEDRACVLLEFDKEMEYANVLLPGVPEQEGWIPI
EHLEAEYLGYCFLMKKNFGFSLEAQEEKEEEDERHWFWSTLSRTRTIYMDILVGSFLVNL
FILILPLYMRNVFDRVIPNTALDTLWVLTYGVVAIFVLEAFLRFLRSYFMEIAAKKSDVI
MSSKIFEHVMDMKLSEQIGSVGAFSSDLKQYESIRNFLTSTVVTTLVDLPFSILFLLVVY
WVAGDVVYIPLMTIVLIVVYAFLIKGPIRTSIRNSNQASAVKNSILLESLNAIETIKAFN
YNSVMQWKLEEATGNIAQRGLKSRVLNGSIATATSFLIRVQTVAVIVASVYMIHQGILTT
GGLLVAYILSSRAVNPVGKLVMLILQFNKARAGFRAIEKVMGSAIEHPKEREFISASHLK
GKIDFVNVDFAYPDSARNALHDVSFTIEPGEHVAIMGEMGSGKTTIINLLMGFYAPKEGM
ILADDVEMDQYAPAELRKQIAYVPQEIVLLQGTIKENIALKHPGIDSHEIVEAARLSGAL
RYINLNPDGFNMKIKEKGQNVSGGQRQSIGIARALIDDFSLVLFDEPTSHLDEESERIAI
LGISQKIKGKTALFVTHKDAVLELVERIILLERGEVVMDGTKAEVLAYLKKSEVHSA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaacagaatcgttccgggctgcttgacgccctgttggctgttgcaaaactctat
caccaggaagtgaccgcggagatcgtcctggcggggttgccggtcgacccggaggacccg
aaactgttcgaacccgacccccagcgctcccgttcgctttttagccgggcggcggaaaag
gcgggcttctccagtacccttcaaaagaaatccctgcgcaagatcgcacagcacctgctg
ccgtgtatcctgatcctgaaagaggatcgcgcctgcgtgctgctcgagtttgacaaagag
atggagtatgcgaacgtgctgcttcccggcgttcccgagcaggaggggtggattcccatt
gaacacctggaagcggagtacctcgggtactgtttcctgatgaaaaagaacttcgggttc
agcctggaagcgcaggaagagaaggaagaggaggacgaaaggcactggttctggagtacg
ttgtcgcgcacaagaacgatctatatggacattctggtcggctccttcctggtcaatctt
tttattctgatcctgccgctgtatatgcgcaacgtttttgaccgggtcatcccgaatacg
gccctcgacacgctctgggtcctcacctacggtgtcgtggccatcttcgtgctcgaagcc
tttttacgttttttgcggagctactttatggagatcgcggcgaaaaagagcgacgtgatc
atgtcgtcgaagatcttcgagcacgtcatggatatgaagctctccgagcagatcggttcc
gtcggcgcgttttcaagcgacctgaaacagtacgagagcatccggaactttctgacctcc
accgtcgtgacgaccctcgtcgacctcccgttttcgattcttttcctgctggtggtttac
tgggtcgccggcgatgttgtctatatcccgctgatgacgatcgtccttatcgtcgtgtac
gccttccttataaaaggaccgatccggaccagcatccgcaactccaaccaggcatcggcg
gtgaaaaacagcattctgctcgaaagcctcaatgccattgaaacgatcaaggccttcaac
tacaacagcgttatgcagtggaagctggaggaggcgacggggaacattgcccagcggggg
ctcaaatcccgcgtcctcaacggctccatcgcgacggcgacctcctttctgatccgcgta
cagacggtcgccgtgatcgtggccagcgtctacatgatccaccagggcatactgacgacg
gggggattgctggtcgcctacatcctttcgtcgcgggccgtcaaccccgtcgggaagctg
gtgatgctgatcttgcagttcaacaaagcccgtgcgggcttccgcgcgatcgagaaggtg
atgggaagtgccatcgaacaccctaaagagcgggagtttatcagtgccagccatctcaaa
ggaaagatcgatttcgtcaatgtcgatttcgcctaccccgattcggcgcgcaatgccctg
catgacgtctcgtttacgatcgaacccggcgaacacgtcgccatcatgggagagatggga
tcgggcaagacgaccatcatcaacctgctgatgggcttttatgcccccaaggagggaatg
atcctcgcggacgacgtcgagatggatcagtacgccccggcggagctgcgcaaacagatt
gcctacgttccccaggagatcgttctgctgcaggggacgatcaaggagaacatcgccctg
aagcatcccggtattgattcgcacgagatcgtcgaggcggcacgcctgagcggcgccctg
cgctacatcaatctcaaccccgacggcttcaatatgaagatcaaggagaagggacagaac
gtttcgggcgggcagcgccaaagcatcgggatcgcacgggccctgatcgacgatttctcc
ttggttctctttgacgagccgacctcgcacctggacgaagagagcgagcgcatcgccatc
ctcgggatctcccagaagatcaaggggaagacggcgctcttcgtgacgcacaaagacgcc
gttttggaactggtcgagcgcatcatcctgctcgagcgcggggaggtcgtgatggacgga
acgaaggcggaggtcctcgcctaccttaaaaagtcggaggtgcacagtgcttga
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