Thiomicrolovo immobilis: WCX72_07325
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Entry
WCX72_07325 CDS
T11235
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
timm Thiomicrolovo immobilis
Pathway
timm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WCX72_07325 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
timm03000
]
WCX72_07325 (nifA)
Transcription factors [BR:
timm03000
]
Prokaryotic type
Helix-turn-helix
Other families
WCX72_07325 (nifA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
GAF
AAA_2
GAF_2
AAA
Mg_chelatase
AAA_16
bpMoxR
GAF_3
AAA_7
OAS1_C
HTH_50
Motif
Other DBs
NCBI-ProteinID:
XAU04314
LinkDB
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Position
1425586..1427226
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AA seq
546 aa
AA seq
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MMYDSPVIPDRPECKTCSLTFAYKEIELLYEIAVILASSTDIKETIEQGMRLLKRHNYLE
RCALFLLNEEDVLDLYASIDLTEQQRLMATYKLGEGATGLAAQGGEPVVIENIHNSIDYL
NKMGIVNSKSVSYVAVPVIQDDAVTGVISANLGPNAPLNFDEIVRMLTIVGSLFSGTLAI
QQRYLKEKEELNQLKMYYKEEMLSEHRFENIIGRSTKMRQIFSMLETVAPTDATILVRGE
TGTGKELIATAVHNLSQRKNGPFIKLNCAAISETLLESELFGHEKGAFTDAKEMRKGRFE
LADGGTLFLDEIGDITPALQVKLLRILQEQEFERVGGTKTIKTNVRLVAATNRNLEDMVK
KAEFREDLYYRLNVIPLNLPPLRERYEDVKLLVEHYMKKFMKEHNKSMVLSKAALELLLD
YPWPGNIRELQNTMERLVLICPEGEVQPEMLNHVLPFNYQKLYNPSTPEPTPQPVPAAPV
APPPIEEAPANAESHPVTKATLQELEKESIIQALIENRGIQTKAAAQLGMTPRQIGYKIK
KYGIDI
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgactcccccgtgatccccgacaggcccgaatgtaagacctgttcgttgacc
tttgcctacaaagagatcgaactgctttacgaaatcgcggtcatcctggccagttcgacg
gacatcaaggagacgattgaacagggcatgcgcctgctcaagcgtcacaactacctggaa
cgctgtgcacttttcctgctcaatgaagaagatgtcctggacctgtacgcttcgatcgac
cttaccgaacagcagcgcctgatggcgacctacaaactcggcgaaggcgcgacgggtctg
gcagcacagggcggcgaaccggtcgtgatcgaaaatatccacaacagtatcgactacctc
aataaaatgggtattgtcaacagcaaatccgtctcctacgtcgccgtgccggtcatccag
gacgatgccgtcaccggcgtcatctccgccaacctcggccccaacgcgccgctgaacttc
gacgagatcgttcgcatgctcaccatcgtcggttccctctttagcggaacgctcgccatc
cagcagcgctacctcaaggagaaagaggagctcaaccagctcaagatgtactataaagag
gagatgctcagcgagcaccgcttcgagaacatcatcgggcgcagtacgaagatgcgccag
atcttcagcatgctcgagaccgttgccccgaccgacgcgacgatccttgtacgcggtgag
acgggtacaggtaaggagctgatcgcgacggccgtgcacaacctcagccagcgcaagaac
ggtcccttcatcaagctcaactgcgccgccatcagcgagaccctgctcgaatccgaactc
ttcggtcacgaaaagggcgcctttaccgacgccaaagagatgcgcaaagggcgcttcgag
ctggccgacggcggcaccctcttcctcgacgagatcggcgacatcaccccggccctgcag
gtcaaactgctccgtatcctccaggagcaggagttcgaacgcgtcggcggtacgaagaca
atcaagaccaacgtccgccttgtcgcggcgacgaaccggaacctcgaggatatggtcaaa
aaagcagagttccgcgaggacctctattaccgactgaacgtcattccgctgaacctgccg
ccgctgcgcgaacgctacgaagacgtcaaactgctcgtcgaacactacatgaagaagttc
atgaaagagcacaacaagagcatggtcctctccaaggcggcactggagctgctgctcgac
tacccctggccgggcaatatccgggaactgcaaaatacgatggagcgcctcgtgctgatc
tgccccgagggcgaagtccagccggagatgctcaaccacgttctgccgttcaattaccag
aagctctacaacccctccacgccggagccgacaccgcagcccgtgccggcagcccctgtc
gccccgccgccgatcgaggaggcgccggccaacgccgaatcgcacccggtcaccaaggcg
accctgcaggagctggaaaaagagtccatcatccaggccctgatcgagaaccgcggcatc
cagaccaaagcggcggcccagctgggcatgacgccgcgccagatcggctacaagatcaag
aagtacggcatcgacatctag
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