Thiomicrolovo immobilis: WCX72_09295
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Entry
WCX72_09295 CDS
T11235
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm03030
DNA replication
timm03430
Mismatch repair
timm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WCX72_09295
03430 Mismatch repair
WCX72_09295
03440 Homologous recombination
WCX72_09295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
timm03032
]
WCX72_09295
03400 DNA repair and recombination proteins [BR:
timm03400
]
WCX72_09295
Enzymes [BR:
timm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WCX72_09295
DNA replication proteins [BR:
timm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WCX72_09295
DNA repair and recombination proteins [BR:
timm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WCX72_09295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
XAU04691
LinkDB
All DBs
Position
complement(1794478..1795107)
Genome browser
AA seq
209 aa
AA seq
DB search
MFKAWRKQRNRKRLKDEAYAFLFEPYDGDEVVVFDTETTGLDPKTDEIVSIGAVKVKGNR
ILTSETFEVYLKTSRPIPAESIEVHGIRPCDLEYALSPPEGIEKFLHFIGPRPLAGYYLE
FDVAMINRYVKPWLGVELPNPKTEVSGLYFDKKNFGIPQGNIDLRFDTILANLGVPPMGR
HNAVNDAIMTAMIFIKLNNTIKLKTGERT
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggcgtggcgaaagcagcggaaccgcaaacggctgaaggatgaggcgtacgcc
tttttgtttgaaccctatgacggcgacgaggtcgtcgttttcgatacggagacgacgggg
ctcgaccccaaaacggacgagatcgtctccatcggcgcggtgaaggtgaaaggcaaccgg
atcctcacctcggagaccttcgaggtctacctgaaaacgtcccgtcccattccggcggag
agcatcgaggtacacggcataaggccctgcgatctcgagtatgcgctctccccgccggag
gggattgagaagttcctgcatttcatcggcccgcggccgctggcagggtattacctggag
tttgacgtggcgatgatcaaccgctacgtcaaaccctggctcggggtggaacttcccaac
ccgaaaacagaggtctcgggcctttactttgacaaaaaaaatttcggtataccgcaagga
aacattgatttacgcttcgatacaatccttgccaacctgggagtgccccctatggggcgg
cacaatgccgtcaacgacgcgatcatgacggcaatgatctttatcaaattgaacaatacg
attaaactcaaaacaggagagagaacatga
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