Thiomicrolovo immobilis: WCX72_09390
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Entry
WCX72_09390 CDS
T11235
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm00220
Arginine biosynthesis
timm00240
Pyrimidine metabolism
timm00250
Alanine, aspartate and glutamate metabolism
timm01100
Metabolic pathways
timm01110
Biosynthesis of secondary metabolites
timm01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
WCX72_09390 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
WCX72_09390 (carB)
00220 Arginine biosynthesis
WCX72_09390 (carB)
Enzymes [BR:
timm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
WCX72_09390 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_5
ATP-grasp_4
Knl-2-like_dom
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
XAU04709
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All DBs
Position
1816749..1820006
Genome browser
AA seq
1085 aa
AA seq
DB search
MPKRDDIKTILLIGSGPIVIGQACEFDYSGTQAVKTLKELGYRVVLINSNPATIMTDPEF
ADRTYIEPIKEEIIAQIIAKENVDAILPTMGGQTALNAAMSMYEKGMLDGIEFLGANPEA
IKKGEDRQAFKEAMIKLGMDLPHSRYAYNMDEALAAAEEIGFPIIIRASFTLAGGGSGVA
YNIDEYKLLAQRGLDESPITEILVEESLLGWKEYEMEVIRDRADNCIIVCSIENFDPMGV
HTGDSITIAPALTLTDKEYQRMRDASFEILREIGVDTGGSNVQFSVDPKTGRMIVIEMNP
RVSRSSALASKATGYPIAKVATLLAVGFTLDEITNDITGTPASFEPVIDYIVTKTPRFTF
EKFPEAESTLTTGMKSVGEAMAVGRTFKESMQKALCSLETGLCGFDEMAGDMDHIRHEIR
RPNAERMLYVAEGFRRGMGVEELFELSKIDPWFLYQIEEIVAEEQTVDLDILNDTIRLRK
AKANGFSDKKIAQLIAKQGASDIRESDVYNARKRMGIHLEYNEVDTCAAEFEALTPYLYS
TTNITTLPEQPTRASDKKKVMILGGGPNRIGQGIEFDYCCVHAAFALEEMGIETIMYNCN
PETVSTDYDTSDVLYFEPIDLEHVREVIEFEKPNGIIVHFGGQTPLKLANPLTAIGAQIA
GTPAKVIDLAEDREKFSDFVTKHDLKQPENGIATTKEEAISVASRLGYPVLVRPSFVLGG
RAMRIVYKEEELRQYMDEAVSVSNDAPVLVDKFLDQAVELDVDAICDGSEVYIGSVMQHI
EEAGIHSGDSACSLPPLNLSDALLAQVEQQTKTIALGLGVIGLLNIQYAIYQNEVYLIEV
NPRASRTVPFVSKATGMPLAKVATRVMMGDTLRNALAFYDNYDIVIEGDGLLKPRLRDHI
ALKEAVFPFNKLYGADLVLSPEMKSTGEVMGISSSFGVSFAKSQMAAGNRIPTSGTCFLS
FITMDKPAGVEIARGLHEHGFKLVATRGTQKVIEEAGIPCEPVLKISEGRPNIEDMMKNG
DITMAINTSDNNTSKKDAIVIRQIVLRMNIPYFTTLSAARAAIDALGHMKDDAWTAPQAL
QDYLA
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgcgatgacatcaaaacgattctgctcatcggctccggcccgatcgtaatc
ggtcaggcctgcgaattcgactactccggcacccaggcggtcaaaacgctcaaagagctc
ggctaccgtgtcgtcctgatcaactccaacccggcgacgatcatgacggacccggagttt
gccgaccgtacttacatcgagccgatcaaagaagagatcatcgcccagatcattgcaaaa
gagaacgtcgatgcgatcctgccgactatgggcgggcagacggcgctgaatgccgccatg
agcatgtacgaaaaagggatgctcgacggcatcgagttcctcggcgccaatcccgaagcg
attaaaaaaggcgaggaccgccaagccttcaaggaagcgatgatcaaactcggcatggac
ctgccgcattcgcgctacgcctacaacatggacgaagcgctcgcggcggccgaagagatc
gggttccccattatcatccgcgcttcctttaccctcgccggcggcggctcgggcgttgcc
tacaacatcgacgaatacaaactgcttgcccagcgcggtctggatgagagcccgatcacc
gagatcctcgtcgaagagtccctgctgggctggaaagagtacgagatggaagttatccgc
gaccgcgccgacaactgcatcatcgtctgttccatcgagaacttcgacccgatgggcgtc
cataccggcgactccatcacgatcgccccggcattgacgctgaccgacaaagagtatcag
cgcatgcgcgatgcttccttcgagattctgcgcgagatcggcgtcgataccggcggttcc
aacgtccagttctccgtcgatccgaaaacgggacgtatgatcgtcatcgagatgaacccc
cgcgtctcccgctcctcggcactggcgtctaaggcgacgggctaccctatcgccaaagtc
gcgaccctgctcgccgtcggctttaccctcgacgagatcaccaacgatatcaccgggacg
ccggcctccttcgaaccggtcatcgactacatcgtcaccaagacgccgcgcttcaccttc
gagaagttccctgaagccgaaagcaccctgacaacgggaatgaaatccgtcggcgaggcg
atggccgtcggccgcaccttcaaagaatccatgcagaaagcactctgttcactggaaacg
ggcctctgcggctttgacgaaatggcgggcgacatggatcacatccgccacgagatccgc
cggccgaacgccgagcggatgctttacgtcgccgaaggcttccgccgcggtatgggcgtg
gaagagctctttgaactctccaaaatcgacccgtggttcctctaccagatcgaagagatc
gtcgccgaagagcaaacggtcgacctagacatccttaacgacactatccgcctgcgcaaa
gccaaagccaacggcttcagcgacaagaagatcgcccagctgatcgccaagcagggtgcg
agcgacatccgcgagagcgacgtctacaatgcgcgcaaacgcatggggatccacctcgag
tacaatgaggtcgatacctgtgcggccgagttcgaggcgctgacgccctacctctactcc
acgacgaacatcacgaccctccccgaacagccgacgcgcgcttcggacaagaaaaaggtg
atgatcctcggcggcgggccgaaccgcatcggccaggggatcgagttcgactactgctgc
gtccacgcggcattcgccctcgaggaaatggggatcgaaacgatcatgtacaactgtaac
cccgagaccgtctccaccgactacgacacctcggacgtcctctacttcgagccgatcgac
ctcgagcacgtgcgcgaagtgatcgagtttgagaagcccaacggtatcatcgtccacttc
ggcggccagaccccgctgaagctcgcaaacccgctcacggccatcggcgcgcagatcgcg
gggaccccggcgaaggtgatcgacctggccgaagaccgcgaaaaattctccgacttcgtg
accaagcacgaccttaaacagccagaaaacggcatcgccacgaccaaagaggaggcgatc
agcgtcgcttcgcgtctgggctaccctgttctcgtgcgcccctcctttgtcctcggcggc
cgcgctatgcgcatcgtctacaaagaggaggagcttcgccagtacatggacgaagccgtt
tccgtctccaacgacgccccggtcctcgtcgacaagttcctcgaccaggcggtcgagctc
gacgtcgacgccatctgtgacggcagcgaggtctatatcggttcggtcatgcagcacatc
gaagaggccggcatccactccggcgactccgcctgttcgctgccgccgctcaacctcagc
gatgcgctgctcgcacaggtcgaacagcagacgaaaacgatcgcgctcggcctcggcgtc
atcggcctgctgaacatccagtacgccatctaccagaacgaggtctacctcatcgaggtc
aatccgcgcgcatcgcgtaccgtccccttcgtctccaaggcgacagggatgccgctcgcg
aaggttgcgacccgcgttatgatgggcgacaccctgcgcaacgcactggccttctacgac
aactacgatatcgtcatcgaaggcgacgggctgctcaaaccacgcctgcgtgaccacatc
gccctcaaagaggccgtcttcccgttcaacaaactctacggcgccgacctggtcctgagc
ccggagatgaaatcgaccggcgaagtcatggggatcagctccagcttcggcgtcagcttc
gccaagtcgcagatggctgcgggcaaccgtatcccgacttcgggaacctgcttcctctcc
ttcatcacgatggacaaaccggccggcgtcgagatcgcccgcggactgcatgaacacggc
ttcaagctcgtcgccacccgcggcacccagaaggtgatcgaagaggcgggtatcccctgc
gaacccgtcctcaagatctccgaaggacgcccgaacatcgaagacatgatgaaaaacggc
gacatcaccatggcgatcaacacctccgacaacaatacgtcgaaaaaagacgccatcgtc
atccgccagatcgtcctgcggatgaacatcccctatttcacgacgctcagtgccgcgcgc
gccgcgatcgatgcgctcggccacatgaaggacgatgcttggaccgccccgcaagccctt
caagactacctggcctga
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