Thiomicrolovo immobilis: WCX72_10525
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Entry
WCX72_10525 CDS
T11235
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.8.1
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm00010
Glycolysis / Gluconeogenesis
timm00020
Citrate cycle (TCA cycle)
timm00620
Pyruvate metabolism
timm00650
Butanoate metabolism
timm00720
Other carbon fixation pathways
timm01100
Metabolic pathways
timm01110
Biosynthesis of secondary metabolites
timm01120
Microbial metabolism in diverse environments
timm01200
Carbon metabolism
timm01210
2-Oxocarboxylic acid metabolism
Module
timm_M00173
Reductive citrate cycle (Arnon-Buchanan cycle)
timm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
WCX72_10525 (nifJ)
00020 Citrate cycle (TCA cycle)
WCX72_10525 (nifJ)
00620 Pyruvate metabolism
WCX72_10525 (nifJ)
00650 Butanoate metabolism
WCX72_10525 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
WCX72_10525 (nifJ)
Enzymes [BR:
timm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase (ferredoxin)
WCX72_10525 (nifJ)
1.2.8 With a flavin or flavoprotein as acceptor
1.2.8.1 pyruvate synthase (flavodoxin)
WCX72_10525 (nifJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_16
Fer4
Fer4_10
TPP_enzyme_C
Fer4_8
Fer4_9
Fer4_6
Fer4_21
Fer4_2
Fer4_4
Fer4_17
LdpA_Fe-S-bd
Fer4_15
Transketolase_C
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
XAU04921
LinkDB
All DBs
Position
complement(2015867..2019436)
Genome browser
AA seq
1189 aa
AA seq
DB search
MSRIVMDANEAVARVAFKTNEVIAIYPITPSSPMGEHSDEYAENGEKNIFGTVPDVMEMQ
SEGGASGAVHGALQAGALTTTFTASQGLLLMIPNMHKIAGELTPTVFHVAARSLAAQALS
IFGDHTDVMQCRPTGFAMLASCDAQEAQDFALIAQAAALEGRLPVLHFFDGFRTSHELMN
VETLDDAVLKAMISTELVNAHKARALDPEAPVLRGTSQNPDVYFQGRESVNRYYDAFPGI
VQKQMDRFAALTGRQYRLYEYYGCPNPKKLIVLMTSGAKTARETVDALNTLGYETGVLTV
RLFRPFDAERLLEAIPKSVEAIAVLDRTKEPGAYAEPLFSDVMHAYAEAFARGRCKSMPR
IIGGRYGLSSKEFTPAMVKAVFDELKKAESKPRFTVGITDDVTHLSLEAAPFETPSEGVT
QALFYGLGSDGTVGANKNSIKIIGETGEHVQGYFVYDSKKSGSMTISHLRFSPEPIRSTY
LIDTADFVGVHQFVFILKYDILKQAKPGAKVLINAPYDADEVWMRLPRIAQERIIEKGLK
LYIINAYDVAKECGLGRRINTIMQTCFFHIAEVIPPEQAVAKIKESIEKTYGKKGEMIVR
MNFCGVDKAIENLHEINVPDAVGSGADLLPVYKLDVADPFLENVTAKLEAFEGDSVPVSA
IPADGTWPLGTTRYEKREIALDAPVWDPDVCIQCGKCMEVCPHAVIRAKVFDDTLLEAAP
EGFSAVTTKSKTFGEHELFTIKVSVEDCTGCSLCVEMCPAKNKSDLSKKAINMASIEPIH
DAAVAEWDYFLSLPEVDRSRLDRTKVKEAQLLQPLFEFSGACPGCGETPYVKLASQLFGD
RMIVANATGCSSIYGGNLPTTPWAKNAQGQGTAWSNSLFEDNAEFGLGMRASIDRQSHFA
RELLETLRDEVGSELADALAGNAQITEAEIARQRTDVKSLEAKLAGIDREEARLLEGVSS
YLIRKSVWAMGGDGWAYDIGYGGLDHVLASGRNINILVMDTQVYSNTGGQTSKATPIGAV
AKFSAGGKPADAKDLALHALSYGNVYVARVAMGANDAQTLKAFVEAEAYEGVSIIIAYSH
CIAHGYDLRYGMQQQKLAVESGLWPLMRYNPGKIGSDENPFSLDYKEPKTPVKSYMYNEA
RFKMVLKMNAERAGAFLEAATDKAQRDWIRYRDLADSGNLTFSKENVCK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcatcgttatggacgccaacgaagcggttgcgcgcgtcgcattcaaaaccaac
gaggtgatcgcgatctatcccatcaccccctcatcccccatgggggaacactccgacgaa
tatgccgagaatggggagaaaaacatcttcggcaccgtgccggacgtaatggagatgcag
agcgaggggggtgcgagcggcgcggtccacggtgcgctgcaggccggggcgctgacgacg
acctttacggcgtcgcaggggctgctgctgatgatcccgaacatgcataaaatcgccggg
gagctcaccccgaccgttttccacgtcgcggcgcgttcgctggcggcgcaggcgctctcg
atcttcggagaccacaccgatgtcatgcagtgccggccgacggggttcgcgatgcttgcc
tcctgcgatgcccaggaggcgcaggatttcgccctgatcgcccaggcggcggcgctggag
gggcggctgcccgtgctgcactttttcgacggctttagaacgtcgcatgagctgatgaac
gtcgagacgctcgacgatgcggtgcttaaagcgatgatttcgaccgaactggtcaacgcc
cacaaggcgcgcgccctcgaccccgaagctcccgtccttcggggaacgagccagaacccc
gacgtctacttccaggggcgcgagagcgtcaaccgctactatgacgccttccccggcatc
gtccagaagcagatggaccgtttcgcggctttgacgggcaggcagtaccgtctgtacgaa
tactacggctgtcccaacccgaaaaagctgattgtgctgatgacctccggcgcgaagacg
gcgcgcgaaacggtggatgcgctcaatacgctcggatacgaaacgggcgtcctgaccgtc
cgcctcttccgtcctttcgatgccgagcgcctgctcgaagcgatccccaaaagcgtcgag
gcgatcgcggtccttgaccgtacaaaggagccgggggcgtatgcggaaccgctcttctcg
gacgtgatgcacgcctacgcggaagccttcgccaggggacgctgcaaatcgatgccccgt
atcatcgggggacgctacggactctcctccaaggagtttacgccggccatggtcaaagcg
gtcttcgacgaattgaaaaaagcggagtcgaaaccgcgctttaccgtcggcatcaccgac
gacgtgacacacctctccctcgaggccgctcccttcgagacgccgtcagagggggtaacg
caggcgcttttctacggcctgggcagcgacgggaccgtcggggcgaacaagaactccatc
aagatcatcggggagacgggagaacatgtgcaggggtacttcgtctatgattcgaagaaa
tccggctccatgacgatctcgcacctgcgcttctccccggaaccgatccgttcgacctac
cttatcgacacggcggatttcgtcggggtgcaccagttcgtcttcattctcaaatacgat
attctcaagcaggcgaagccgggggcgaaggtgctcatcaacgccccttacgacgccgac
gaggtgtggatgcgcctgccgcggatcgcccaggagcggatcatcgaaaaggggctgaaa
ctctacatcatcaatgcctatgatgtggccaaagagtgcggactggggcggcggatcaac
acgatcatgcagacctgcttcttccatatcgccgaagtgatccctccggagcaggcggtc
gcgaagatcaaggagagtatcgagaagacctacggcaaaaaaggcgagatgattgtacgg
atgaacttctgcggggtcgacaaggcgatcgagaacctgcacgagatcaacgtgccggac
gccgtcggctccggggcggacctgctgccggtttataagctcgacgtcgccgatccgttc
ttggaaaatgtcacggcgaagcttgaagcgtttgaaggcgacagcgttcccgtcagcgcc
atccccgcagacggcacctggccgctgggaacgaccaggtacgagaagcgggagatcgcc
ctggatgccccggtctgggacccggacgtctgtatccagtgcggcaaatgcatggaggtc
tgcccgcacgccgttatccgggcaaaggtgtttgacgatacgctgctggaggcggcgccg
gaaggcttcagcgccgtcacgacgaaatcgaaaacctttggggagcacgagctctttacg
atcaaagtctccgttgaggattgtacggggtgttcgctctgcgtggagatgtgcccggcg
aagaacaagtccgatctctccaaaaaagcgatcaacatggcgtcgatcgaaccgatccac
gacgcggcggtggcggagtgggactatttcctctccctgcccgaggtcgaccgtagccgg
cttgaccgtaccaaggtgaaagaggcgcagctgctgcagccgctcttcgagttttcgggt
gcctgcccgggctgcggggagaccccctacgtcaaactcgcttcccaactcttcggcgac
cggatgatcgtcgccaacgcgacgggctgctcctccatctacggtggcaaccttccgacg
accccttgggcgaaaaacgcgcaggggcaggggacggcctggtccaactccctcttcgag
gacaacgcggagttcggtttggggatgcgcgcgagcatcgacaggcagtcgcacttcgcc
cgggagctcctcgaaaccctgcgcgatgaggtcgggtccgaacttgccgatgcgttggcg
ggcaatgcgcagataacggaagcggagatcgcccgccagcgtacggacgtgaaaagcctc
gaagcgaaactcgccggcatcgaccgggaggaggcgcggcttctggaaggggtgagctcc
tacctgatccgcaaatccgtctgggcgatggggggcgacggctgggcctacgacatcggc
tacggcggtctggaccacgtgctcgcctcggggcgcaacatcaacatcctcgtcatggat
acccaggtctactccaacacgggcggacagacctccaaggcaacgccgataggcgcggtg
gcgaagttctccgccggggggaaacccgctgacgcgaaggacctggccctgcatgcgctc
agctacggcaacgtctacgttgcccgggtggcgatgggtgccaacgacgcgcagacactc
aaggccttcgtggaggctgaagcctacgagggggtctccatcatcatcgcctacagtcac
tgcatcgcccacgggtatgatctgcgctacggcatgcagcagcagaagctggcggtggag
agcgggctgtggccgctgatgcgctacaaccccgggaagatcggtagtgacgagaacccc
ttctccctcgattacaaagagcccaaaacgccggtcaagagctacatgtacaacgaggcc
cgcttcaagatggtgctgaagatgaatgccgaacgggcaggtgctttcctggaggcggca
acggacaaggcgcagcgggactggatacgctaccgcgacctcgccgacagtgggaacctg
acctttagcaaggagaacgtatgcaaatga
DBGET
integrated database retrieval system
