Thiomicrolovo immobilis: WCX72_10555
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Entry
WCX72_10555 CDS
T11235
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
timm Thiomicrolovo immobilis
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
timm02000
]
WCX72_10555
Transporters [BR:
timm02000
]
Other transporters
Pores ion channels [TC:
1
]
WCX72_10555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
OMP_b-brl
OprF
Motif
Other DBs
NCBI-ProteinID:
XAU04926
LinkDB
All DBs
Position
complement(2023638..2024834)
Genome browser
AA seq
398 aa
AA seq
DB search
MTAIVGGVIPEGNLEMNKQGTIGAAVQFNAIFESIKPELELLYSPDVVYKKAGGETTITR
VMLNGVHEYGPLGTAIPYMKAGLGYENMTKLKYDNEDSVMADAGLGFKFPIAEEVALKLE
ALYMLKYNDDRWDNNLAVLAGVNVAFGASEPAAEPAPEPAPAVADAPADSDNDGVADDAD
KCPGTAAGVSVDANGCALDSDSDGVVDGTDKCPDTPAGATVDAMGCQLDGDHDGVVDASD
KCPDTPNGASVDELGCAVDSDGDGVSDLKDNCPNTPEGFKVDMVGCPVVKTLKIRYETAS
AVIAKESEGKVVEFAEFLKESPAYNVKILGHTDSRGSDKYNQGLSEARANSVRTLLIANG
ISEDRIIAEGKGESQPIADNGTKEGRAANRRIEVWLLK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcgattgtcggaggggtgatcccggagggcaatctggagatgaacaagcagggg
acgatcggtgcagcggtccagttcaatgcgatctttgagagtatcaagcccgagcttgag
ctgctctattcgccggatgtcgtctacaaaaaagcagggggcgagacgacgattacccgt
gtcatgctcaacggtgtccatgaatacggcccgctcggaacggcgatcccctatatgaaa
gccggtctggggtatgaaaatatgaccaagctgaagtatgacaatgaagacagcgtgatg
gccgacgccggcctcggattcaagttcccgatcgccgaagaggttgcattgaaactcgaa
gcactctatatgctgaaatacaatgacgaccgctgggataacaatctggccgttcttgcc
ggtgtgaatgttgctttcggcgcttccgaaccggcggcggaacctgcaccggagccggca
cctgctgttgccgatgcaccggcggacagcgacaacgacggggttgcagatgacgcggac
aaatgtcccggcacggcagccggcgtgagcgttgatgcgaacggatgcgcactcgacagt
gacagcgacggcgtggtcgacgggacggacaagtgcccggatacccctgcaggcgcgaca
gtcgatgctatgggatgccagcttgacggcgaccatgacggtgtggtcgatgcttccgat
aaatgccccgacaccccgaacggcgccagcgtggatgagcttggatgtgcggtagacagc
gacggcgacggtgtcagcgacctgaaagacaactgtccgaacacgccggaaggcttcaag
gttgatatggtcggctgccctgttgtcaagacgctgaagatccgctacgagacagcttct
gccgtcatcgcaaaagagtccgaaggcaaagtcgttgaattcgcagagttcctcaaagag
agccctgcatacaacgtgaagattctcggccacacggacagccgcggcagcgacaagtac
aaccagggactttccgaagcacgtgcgaacagcgtcagaacactcctgattgccaacggc
atctccgaagatcgtatcatcgccgaaggcaagggcgagtcccagccgatcgccgacaat
ggtaccaaagagggccgcgcggcgaaccgccgcatcgaagtctggctgctgaaataa
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