Thiomicrolovo immobilis: WCX72_11975
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Entry
WCX72_11975 CDS
T11235
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WCX72_11975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
timm03021
]
WCX72_11975
03400 DNA repair and recombination proteins [BR:
timm03400
]
WCX72_11975
Enzymes [BR:
timm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WCX72_11975
Transcription machinery [BR:
timm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WCX72_11975
DNA repair and recombination proteins [BR:
timm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WCX72_11975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
PASTA
HTH_54
TRAPP
Motif
Other DBs
NCBI-ProteinID:
XAU05195
LinkDB
All DBs
Position
complement(2323184..2324176)
Genome browser
AA seq
330 aa
AA seq
DB search
MKKIKTAPLLPEEFVVEQISDTEANVIAYPFETGYAVSLAHPLRRFLLSSSVGYAPIAIK
IEGAKHEFDSVRGMLEDISDFIINLKSIRFKLKNDAKEATIDYSFVGPCEIKGSDLINDD
VDVVTPDAFLATLNEDATLNFSLKIFQGIGYVPSEDIRDEIEEGYIALDAFFTPVRKATY
AIQNVLVEDNPNFEKVVLNIVTDGQISPLDAFRNALNVMHAQMAVFSSEISIQSPATIER
AEASEEIGKLTAPIEELGLSARSFNCLDRADLKYIGEIVLMSQNDLKNVKNLGKKSYDEI
VEKLEEAGFQVGQEMSDETISVLKKKIESE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatcaaaacagctccgcttctgcccgaagagttcgtcgtcgagcagatcagc
gataccgaagcgaatgtcattgcctatccgttcgagacaggctatgcggtttcactggcg
cacccgctgcgccggttcctgctgagcagctcggtaggctatgcgccgatcgcgatcaag
atcgagggcgccaagcacgagttcgactccgtgcgcggtatgctcgaagatatttctgac
ttcatcatcaacctcaaaagcatccgtttcaaactgaaaaacgatgccaaagaggcgacg
atcgattatagcttcgtcggaccgtgcgagatcaaaggaagcgatctgatcaatgacgac
gttgacgttgtcacaccggacgctttcctcgcgacgctcaacgaagacgcgacgctgaac
ttctcgttgaagatcttccaggggatcggttacgttccgagtgaagacatccgcgacgag
atcgaagagggctacatcgcccttgacgcgttctttacgccggtccgcaaagcgacctac
gcgatccagaacgtcctcgttgaagacaacccgaactttgagaaggttgtcctgaacatc
gtcaccgacggtcagatcagcccgctggacgctttccgcaacgccctgaacgtcatgcat
gcgcagatggcggtcttcagcagcgagatcagcatccagtccccggcaacgatcgaacgc
gccgaagcatccgaagagatcggcaagctgacggcaccgatcgaagagctcggcctttcc
gcacgcagcttcaactgcctggatcgcgccgacctgaagtacatcggtgaaatcgtcctg
atgagccagaatgaccttaaaaacgtcaagaaccttggcaaaaaatcgtatgacgagatc
gttgaaaagctcgaagaagccggcttccaggtcggtcaggagatgagcgatgaaacgatc
agcgtactgaaaaagaaaattgaatctgaataa
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