Thiomicrolovo immobilis: WCX72_12965
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Entry
WCX72_12965 CDS
T11235
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm00061
Fatty acid biosynthesis
timm01100
Metabolic pathways
timm01212
Fatty acid metabolism
timm02024
Quorum sensing
timm04146
Peroxisome
Module
timm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
WCX72_12965
00071 Fatty acid degradation
WCX72_12965
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
WCX72_12965
09145 Cellular community - prokaryotes
02024 Quorum sensing
WCX72_12965
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
timm01004
]
WCX72_12965
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
timm04147
]
WCX72_12965
Enzymes [BR:
timm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
WCX72_12965
Lipid biosynthesis proteins [BR:
timm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
WCX72_12965
Exosome [BR:
timm04147
]
Exosomal proteins
Exosomal proteins of breast milk
WCX72_12965
Exosomal proteins of breast cancer cells
WCX72_12965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Methyltransf_25
TehB
Methyltransf_11
Methyltransf_31
Methyltransf_23
Methyltransf_12
TPMT
MetW
Motif
Other DBs
NCBI-ProteinID:
XAU05381
LinkDB
All DBs
Position
complement(2506232..2508523)
Genome browser
AA seq
763 aa
AA seq
DB search
MKIGKVWNEKFSREGYLYGTQPNSYLKEVMDALPQGARILFLGEGEGRNACYAAEQGFEA
HAIDASEVGLQKLQEMAKSRGVRVEVSHMDLAHWEPEERYDAVLCSYLHLEEPLRTAVFV
KALSAVKDDGLFAGEFFATTQIERDSGGPKAPELLYDLKSFDKLKRPWFDCEELEACSIE
LDEGKGHQGLADVIRVRFRHNSDPRFKITLPELTLGALLERSVSEYGQRPVLRNVDESVA
LSYTEFGEAVAALKTRLADAGIGIGDRVALCSENMPNWGVVYFAVTTMGAVIVPILPDFH
DNEVRHIITHSQSKAVFASAKKREALDEGILSSLVLLVLTEDLSDDPTFAKRSPTILQKV
KEGVKGSKHADVLYRPSEDDMAAIIYTSGTTGSSKGVMLTHRALTFEALVAQCVVEVVAE
DRFLSILPLAHTYECSVGFLLPIVNGASVYYLSKVPTPKILIDAMAKVKPTVILSVPLVI
EKIFKNRILSNFHKNALMRTLYAVPFIRKALHKIAGKKLLQTFGGELRIFGIGGAPLSPM
VEHFLDDAGFPYAIGYGLTETAPLLAAGAPFKTKVGAIGPAISSVELRIADPDEKGVGTV
WAKGPNVMLGYYKDPEKSAEVLHEDGWFNTEDLGYIDAEGYLFLSGRSKNVILGPSGENI
YPEQLEAKIMEDELVEDALVYEVEKQLVARIHLNYEMLDEHMDITKLSETEQHIEIEKLL
ERIKTETNESVSRFSRIARVIEQREPFVKTPTKKIKRYLYTNG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcggtaaagtatggaatgagaaattttcacgggaggggtatctgtacggtacc
cagcccaacagctacctcaaagaggtgatggatgcactccctcagggtgcgcggatcctt
ttcctcggcgaaggggagggcagaaacgcctgttacgcggcggagcagggctttgaagcc
catgccatagatgcgtccgaagtcgggctgcaaaagctgcaggagatggcaaagagcagg
ggggtgcgcgtcgaggtctcgcacatggatctggcacactgggagccggaggagcgctac
gacgcggtgctctgttcgtaccttcacctcgaggagccgctgcgcacggcggtctttgtc
aaggcgctctccgccgtcaaagatgacggcctgttcgccggcgagttcttcgcgacgacg
cagatcgaacgcgactccggcggtccgaaggcgcccgagctgctgtatgatctcaagagc
ttcgataagctcaaacgcccctggttcgactgcgaggagcttgaagcgtgcagtatcgag
ctggacgaagggaaggggcaccagggacttgcggacgtcatccgcgtgcgtttccgccac
aacagcgacccgcgtttcaagatcacgctgccggaactgacgctcggcgcactgctggag
cgttcggtctcggaatacggccagcggcccgtcctgcgcaacgtcgatgagagcgtggcg
ctgagctacaccgaattcggggaagcggtcgccgcgctgaagacgcgcctggccgatgca
ggcatcggtatcggagaccgcgtcgcgctttgcagtgaaaacatgccaaactggggggtc
gtctatttcgccgtgacgacgatgggggctgtcatcgtcccgatcctccccgacttccat
gacaatgaagtgcgccacattatcacccattcgcagagtaaggcggtcttcgcatcggcc
aagaagcgcgaggcgctcgacgaggggatactctcctcgctggttctgctggtgctgacc
gaggatctcagtgatgatcccaccttcgccaaacggagtcctacgatccttcagaaggtc
aaggagggggtaaagggctctaaacacgctgacgtgctttacaggccctctgaggacgat
atggcggcgattatctatacttccggcacgacaggtagcagtaaaggggtgatgctgacg
caccgcgccctgacgttcgaggcgctcgttgcgcaatgcgtggtcgaggtggtggcggag
gaccgtttcctctccatccttccgctggcgcatacctatgagtgttccgtcggcttcctg
ctccccattgtcaacggtgccagcgtctactacctttccaaggtcccgacgccgaaaatc
ctcatcgacgcgatggccaaggtcaaaccgacggtcatcctctccgttccgctggtgatc
gagaagatcttcaagaaccgcattctgtcgaactttcacaagaacgcgcttatgcggacc
ctctatgccgtaccgttcatccggaaggcgctgcataagatcgccgggaaaaagctcctg
cagactttcggcggcgagctgcgcatcttcggaataggcggggcaccgctttcgccgatg
gtggaacacttcctggatgacgcgggcttcccgtatgccatcggttacggcctgacggag
acggcgcccctgctcgcggccggcgctccttttaagacgaaagtaggggcgatcggcccg
gcgatctcctcggtcgagctgcgcatcgccgacccggacgaaaagggggtcgggacggtc
tgggccaaggggccgaacgtcatgctcggctattacaaggatccggagaagagcgcagag
gtgctgcacgaagacggctggttcaatacagaggacctcggctatatcgatgcggagggc
taccttttcctcagcggacgttccaaaaacgtcatactcggtcccagcggcgaaaatatc
tatcccgagcagctcgaggcgaagatcatggaggacgagcttgtcgaggatgcgcttgtc
tacgaggtcgaaaagcagctcgtggcgcggattcacctcaattacgaaatgctcgacgaa
cacatggacatcacgaagctctccgagacggagcagcacattgagattgaaaaactgctc
gagcgcatcaaaacagagacaaacgaaagcgtctccaggttttcccgtatcgcgcgggtg
atcgagcagcgcgaacccttcgtcaaaacgccgacgaaaaagatcaaacgttacctctat
acgaacggctaa
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