Thiomonas intermedia: Tint_0002
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Entry
Tint_0002 CDS
T01227
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
tin
Thiomonas intermedia
Pathway
tin03030
DNA replication
tin03430
Mismatch repair
tin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tint_0002
03430 Mismatch repair
Tint_0002
03440 Homologous recombination
Tint_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tin03032
]
Tint_0002
03400 DNA repair and recombination proteins [BR:
tin03400
]
Tint_0002
Enzymes [BR:
tin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tint_0002
DNA replication proteins [BR:
tin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tint_0002
DNA repair and recombination proteins [BR:
tin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tint_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta_3
DNA_pol3_beta
Motif
Other DBs
NCBI-ProteinID:
ADG29418
UniProt:
D5X2E4
LinkDB
All DBs
Position
2138..3253
Genome browser
AA seq
371 aa
AA seq
DB search
MNRLTSSRDELLKLLGQGAGIVERRQTLPILANVLIQHNANGTLFITSDMEVQIRLQAGE
AVQTSAEDAAITVNMRKLLDILRAASPGNVTLEWSDGKMTVRAAKSRFSLQTLPAEDFPL
VRAATDFSDHALRLPQKLLKRLLGLTHFAMAQHDIRYYLNGMLWVADGQQMHLVATDGHR
MTLASAPLEKAVERREIILPRKTVLELSRLLSDEDDAMIDIALASNQARLTLDGLEFTSK
LIEGKFPDYQRVVPKGHRNMLQVERTTLQAALQRVAILTNDKFKGVRVNLEPGLLRLTSI
NAEQEEAQEEIDIDYGGDVIEIGFNIAYLIDALANMTSDQIRLELQDGNSSALFTMPDEP
NFKYVVMPMRI
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaacagattgacgtcttcccgtgatgaactgctcaaactgctcggacagggagcgggc
atcgtcgagcgccgccaaaccctgcccatcctcgccaatgtgctcatccagcacaacgcg
aatggcactctgttcatcaccagcgatatggaagtgcagatccgtctgcaagcgggcgaa
gcggtacagaccagtgcggaagacgcggccatcaccgtcaatatgcgcaagctgctcgac
atcctgcgcgcggccagcccgggcaatgtgacccttgaatggtcagacggcaagatgacg
gttcgggccgccaaaagccgcttcagtctgcaaaccctaccggcagaagactttccgctg
gtacgcgctgcgaccgacttcagtgaccacgccctgcgcctgccgcaaaagctgctcaag
cgcctgctcggcttgacccacttcgccatggcgcagcacgatatccgctactacctcaat
ggcatgttgtgggtggccgatgggcagcagatgcatctggtggccaccgacggtcaccgc
atgaccctggcttccgccccgctggaaaaggcggtggagcggcgcgaaatcattctgccg
cgcaagaccgtgctcgaactcagccgcctgctcagcgatgaagacgacgccatgatcgac
atcgccctggccagcaatcaggcgcgcttgaccctggacgggctggaattcaccagcaag
ctcatcgaaggcaagtttcctgattaccagcgcgtcgtgcccaagggccaccgaaatatg
ctgcaggtcgagcgcacgactctgcaggcggcgctgcagcgcgtggccattctgaccaac
gacaagttcaaaggcgtgcgcgtcaacctcgaaccggggctgttacggctgacctccatc
aacgccgagcaagaagaagcgcaggaagaaatcgatatcgactacggcggcgacgtcatc
gaaatcggcttcaacatcgcctacctcatcgacgcgctggccaatatgacctccgaccag
attcgcctcgaactgcaggacggcaacagcagcgcgctgttcaccatgcccgacgagccc
aacttcaagtacgtggtcatgcccatgcggatctga
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