Thiomonas intermedia: Tint_0171
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Entry
Tint_0171 CDS
T01227
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
tin
Thiomonas intermedia
Pathway
tin02010
ABC transporters
tin02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Tint_0171
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Tint_0171
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tin02000
]
Tint_0171
Transporters [BR:
tin02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Tint_0171
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
TAT_signal
HTH_AT3G52170
Avl9
Motif
Other DBs
NCBI-ProteinID:
ADG29584
UniProt:
D5X3K8
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All DBs
Position
184929..186191
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AA seq
420 aa
AA seq
DB search
MNKEDSNEQVQMDRRTLIKAGGAAGLAALLGTQVPSWGASETPVKIGLIDPITSTFAALG
QSEIKGAKFAEAEINKAGGVMGRPLQIFVEDSAGNPGTAVDKASRLLSQNKVDFLMGTVN
SAASLAVSQFANRHDKLFVCTGGHVDSLTGKECKTTTFRTCSTTWMLTAGDFETLYKKFG
KKWYFLTTDYAFGQSEQADYTTQLKKAGGSVVGGALVPVGATDFSSYLIDVKAKSPDVLC
LLLAGNDQVNCMKQIAQFGINKDIAVGGALFELEQAQALPEAARYGWWTMEWYWNQPNTP
HVADFVKRYTAANKGEYPTARAWFGFATTHAIRLAVEKAKSLETAKVVKAMEGLVLPPEI
ALQPGNVFYRPQDHQLMLGMFPGHVIQTGKYPNLFDVSGIVPGEKIALPPSETGCVLPRA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggaagactcgaatgagcaggttcagatggatcgtcgcacgctgatcaaggcg
ggcggcgcggcgggtttggccgctttgctgggcacgcaggtgccgagctggggcgctagt
gagacgccggtgaaaatcgggctgattgatcccatcaccagcacctttgcagcgctcggg
cagagcgaaatcaagggcgccaaattcgctgaagccgagatcaacaaggcgggtggcgtg
atgggccgtcctctgcagatcttcgtggaagacagcgcaggcaatcccggcactgcggtg
gacaaggcctcgcgtctgctgagccagaacaaggtggacttcctcatgggcacggtcaac
tcggcggcctcgctcgccgtgtcgcagtttgccaatcgccacgacaagctcttcgtctgt
accggcggccacgtcgacagcctgaccggcaaggagtgcaagaccacgaccttccgcacc
tgctcgaccacctggatgctgacggccggtgacttcgagacgctctacaagaaattcggc
aagaagtggtacttcctgaccactgactacgcctttggtcagtctgagcaggccgactac
accacacagctcaagaaggcgggaggctccgtggtgggcggtgcgctggtgcccgtgggg
gcgaccgatttttcgtcctatctgatcgacgtgaaagccaagtcgcccgacgtgctgtgc
ctgctgctggccggtaacgatcaggtcaactgcatgaagcagatcgcgcaattcggcatc
aacaaagacatcgccgtgggcggcgctttgttcgagctggagcaggcgcaggcattgccc
gaggcggctcgctacggctggtggaccatggagtggtactggaaccagccgaacaccccg
catgtggcggatttcgtcaagcgttacaccgcagccaataaaggggaatacccgacggcg
cgcgcatggtttggttttgccaccacgcatgccatccggctggcggtggaaaaggccaag
tcgctcgaaacggccaaggtggtcaaggcgatggagggactggttctgcccccggagatc
gcgcttcagcccggcaatgtgttctaccgtccgcaggatcaccaactgatgctgggcatg
ttcccggggcacgtgattcagacgggcaagtatccgaacctgttcgacgtttcgggcatc
gtgccgggcgagaagatcgcgctgccgccttcagaaaccggctgcgtgcttccgcgcgcc
tga
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