Thiomonas intermedia: Tint_0341
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Entry
Tint_0341 CDS
T01227
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
tin
Thiomonas intermedia
Pathway
tin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tint_0341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tin03400
]
Tint_0341
Enzymes [BR:
tin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Tint_0341
DNA repair and recombination proteins [BR:
tin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tint_0341
Prokaryotic type
Tint_0341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ADG29752
UniProt:
D5X4F1
LinkDB
All DBs
Position
complement(365447..366613)
Genome browser
AA seq
388 aa
AA seq
DB search
MRKRRAAPSFLIPLGGPDANAAGLGALSAPTLPHFASRLVRWQRQHGRHDLPWQVRDPYR
VWLSEIMLQQTQVATVIDYYARFTALFPTVQALAEAPEDAVLAAWSGLGYYQRACNLHRC
AQIVVETHGGAFPQTAESLATLPGIGPSTAAAIAVFCFDERAAILDGNVQRVLCRSHGID
DPVPTTATTRKLWSLARSLLPEAQDMAAYTQGLMDLGATLCKPRQPACTECPFATDCRAH
LAGDPQRLPVRKAARKSRPQRSTVMLWLRNSPDGLCWLEKRPQLGLWPGLWSLPQFDATE
QALQFAAQIGPVIGQRELAPFRHAFTHFELTVRPLLVDVQAQPRAAEPQGQWLALEQAAQ
LGLPAPVRSLLLQQVPPADAPPPAVLHK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaacgcagggccgccccaagttttctcatccccctcggggggcctgacgcgaac
gcggcaggtctgggggcactctcagcgccaaccctgccgcatttcgccagccgcctggtg
cgctggcagcgccagcacgggcggcacgacctgccctggcaggtgcgcgatccctaccgg
gtctggctgtcggagatcatgctgcagcagacgcaagttgccacggtcatcgattactac
gcgcgtttcacggccctgtttcccacggtgcaggcgctcgccgaggcgcctgaagatgcc
gtgctcgccgcctggagcgggttgggctactaccagcgcgcctgcaatctgcatcggtgc
gcgcagatcgtggtcgaaacgcatggcggcgcattcccgcaaacggcggaaagcctcgcc
acgctgccgggcatcggcccctccacggcggcggcgattgccgtgttctgcttcgacgag
cgcgccgccattctcgacggcaatgtgcagcgcgtgctctgccgcagtcacggcatcgac
gatccggttcccaccacggccaccacgcgcaagctctggtcgctcgcgcgcagcctgctg
cccgaggcgcaagacatggccgcctacacgcaggggctgatggatcttggcgccaccttg
tgcaaaccgcgccagcctgcctgcaccgaatgtccttttgccacggattgccgcgcccat
ttggcgggcgatccgcagcgcctgcccgtgcgcaaggcggcgcgcaaaagccgcccgcag
cgcagcaccgtcatgctctggttgcgcaactcgccggacggtctttgctggctggaaaag
cgcccgcaactgggcctctggccggggctgtggagcctgccgcaattcgatgcgaccgag
caggcgctgcagttcgccgcgcagatcgggccggtgatcggccagcgagaactggcgccg
tttcgccatgcgttcacccatttcgagctgaccgtgcgccccttgctcgtcgacgttcaa
gcccagccccgggccgcggagccacagggccaatggctcgcgcttgaacaggccgcgcag
ctggggctgcccgcgccagttcgcagcctgttgctgcagcaagtgccgcctgctgacgct
ccacccccggccgtgctgcacaaatga
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