Thiomonas intermedia: Tint_0596
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Entry
Tint_0596 CDS
T01227
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
tin
Thiomonas intermedia
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tin03400
]
Tint_0596
DNA repair and recombination proteins [BR:
tin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Tint_0596
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
GvpD_P-loop
DUF7125
DnaB_C
AAA_16
ChlI
Lon_C
AAA_14
AAA_22
nSTAND3
AAA_5
NTPase_1
AAA
AAA_24
nSTAND_NTPase5
zf-RING_10
NPHP3_N
TackOD1
Motif
Other DBs
NCBI-ProteinID:
ADG29996
UniProt:
D5X5U3
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Position
complement(631363..632925)
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AA seq
520 aa
AA seq
DB search
MAKPQTVYICSECGGKSAKWQGQCPHCQAWNTLVETAERSTDAARPGARHGAAAAQFAGR
GGLTAASGPVLLTEVQAERHAHRTSGIDELDRVLGGGLVPGGVLLLGGDPGIGKSTLLLQ
VLANLSAELPVLYISGEESAAQVALRAQRLGLKDAPVRLMAETQLEVMLDELARGPGAGP
PQGGRFPLPTSPTERGRSNHSLPTGGEGRGGDALLGGQRANANVGAYSIAVIDSIQTVYT
EALSSAPGSVSQVRECAAQLTRAAKASGITLVLVGHVTKEGALAGPRVLEHMVDTVLYFE
GDTQSRFRLIRAIKNRFGAVNELGVFAMTEHGLKGVSNPSAIFLSTHAEPVPGTCVLATL
EGTRPLLVEVQALVDNAAAPSPRRLSVGLDAARLAMLLAVLHRHAGVASGDQDVFVNAVG
GVRITEPAADLAVLLAIQSSLRNRPLPRGLLAFGEVGLAGEIRPAPRGQERLREAAKLGF
SAAIIPAANAPKGAGKQFEGLELHPVSRIEEALDVVRGLG
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaccccaaactgtttatatctgctccgagtgcggcggcaagtccgccaagtgg
cagggccagtgcccgcactgccaggcctggaataccttggtggaaacggcagagcgcagc
accgatgccgcccgccccggcgcacggcacggcgccgcggcagcgcagttcgccgggcgc
ggcggcctcaccgcggcgagcggcccggtgctgctcaccgaggtgcaggccgagcgccac
gcgcaccgcaccagcggcatcgacgaactcgaccgggtgctcggcggcggactggtgccc
ggcggcgtcttgctgctcggcggcgatccgggcatcggcaagtccaccctgctgctgcaa
gtgctcgccaatctgtccgccgaactgccggtgctctatatcagcggcgaagaatccgcc
gcgcaggtggcgctgcgcgcccagcgcctggggctgaaagatgcgccggtgcggctgatg
gccgaaacgcagctggaggtcatgctcgacgagttagcacgcggccccggcgccgggccg
ccccaaggcgggcgtttccccctcccaacctcccccaccgagcgggggaggagcaatcac
tccctccccacgggtggggagggtcggggtggggatgccctcctcggggggcagcgagcg
aatgcgaacgtgggggcctattccatcgcagtgatcgactccatccagacggtttacacc
gaggcgctgtcctcggcgccggggtcggtgtcgcaggtgcgcgaatgcgcggcgcaactc
acccgcgcggccaaggccagcggcatcaccctggtgctcgtcggccatgtcaccaaggaa
ggcgcgctcgccggcccacgcgtgctggagcacatggtcgataccgtgctgtatttcgag
ggcgacacgcagtcgcgcttccggctgattcgcgccatcaagaaccgcttcggcgcggtg
aatgaactgggcgtgttcgccatgaccgagcatggcctcaaaggcgtgtccaacccctcg
gccatcttcctctccactcacgccgagccggtgcccggcacctgcgtgctcgccacactg
gagggcacccgcccgctgttggtggaggtgcaggcgctggtggacaacgccgccgcgccc
agcccgcgccgcctgtccgtggggctggacgcagcgcggctggccatgttgctggccgtg
ctgcatcgccatgcaggagtcgccagcggcgatcaggacgtgttcgtcaacgccgtgggc
ggggtgcgcatcaccgagcccgcggccgatctggccgtgctgctggccattcaaagttcg
ctgcgcaaccgcccgctaccgcgcggtctgctggccttcggcgaagtcggcctggcgggt
gaaatccgccccgccccgcgcgggcaagagcgcctgcgcgaagccgccaagctcggcttc
tccgctgccatcattccggctgccaatgcccccaagggtgcgggaaaacagttcgaaggg
ctggagttgcacccggtgtcgcgcatcgaagaagcgctggacgtggtgcgcgggctgggg
tga
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