Thiomonas intermedia: Tint_0607
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Entry
Tint_0607 CDS
T01227
Name
(GenBank) transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
tin
Thiomonas intermedia
Pathway
tin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tint_0607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tin03000
]
Tint_0607
03400 DNA repair and recombination proteins [BR:
tin03400
]
Tint_0607
Enzymes [BR:
tin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Tint_0607
Transcription factors [BR:
tin03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Tint_0607
DNA repair and recombination proteins [BR:
tin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tint_0607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
ADG30007
UniProt:
D5X5V4
LinkDB
All DBs
Position
647400..648854
Genome browser
AA seq
484 aa
AA seq
DB search
MQLDPDTCYSALLTRDRRFDGWFYVGVSSTGVYCRPVCAVRTPLKRNCSFYPSAAAAEQA
GYRPCLRCRPELAPGHGVLDLSGQLARAAAALIDQGLTDPAGLSAVARRVGITPRHLRRI
FEAEFGVSPVAYAQTQRLLLAKGLLTDTTLPMAAVAGAAGFGSVRRFNHLFRTRYGLTPL
SLRRTGGACGQEDLLTVSLAYRPPYAWRQMVDFLARRAVDGVEHVSADGYGRAVALNSEP
GSAPVTGWIAVTHEPQRHSLRLTLPPRLARHIGRIVGGVRRLFDLDARPDLIDAHLPEFA
AEAPGLRIPGAFDGFEIAMRAVVGQQIGLPQARLILGRLAQRHGTSVPDAPDGLRRTLPD
AATLAACTPEALRACGLTGARALSLHALALAVAEGRVALQPLAPVEPTLAALQALPGIGD
WTAQLIALRGLGWPNAFPAGDLVLRKQLGLARPADMLAHAARWAPWRGYAAVHLWRRATE
GETS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcgatcccgacacctgctacagcgcgctgctcacccgcgaccgccgcttcgat
ggctggttttacgtcggcgtgtcgtccaccggggtgtattgtcggccggtgtgtgcggtg
cgcacgccgctcaaacgcaactgcagcttctatcccagcgcggcggcggcggagcaggcg
ggttatcggccctgcctgcgttgccgccccgaactggcgccggggcacggcgtgctcgac
ctctcgggccagttggcccgcgctgccgctgcgctgatcgaccaggggctgaccgatccc
gccggattgagcgccgtggcccggcgcgtgggcatcacgccgcggcatttgcggcgcatc
ttcgaggcggaattcggcgtctcgcccgtggcgtatgcgcagacgcagcggctgctgctg
gccaagggtctgctcaccgacacaacgctgccgatggcggcggtggccggcgcggcgggc
tttggcagcgtgcggcggttcaaccatctgtttcgcacccgctatgggttgacgccgctg
agcctgcggcgcacgggcggggcctgcgggcaggaagacctgctcaccgtgtcgctcgcc
taccggcccccctacgcctggaggcagatggtcgattttctcgcgcgtcgcgcggtggac
ggtgtggagcatgtcagcgccgatggctacggccgcgcggtggcgcttaacagcgagccg
ggctcggcgccagtcacaggctggatcgcggtgacccacgaaccccagcgccacagcctg
cgccttaccctgccgccgcggctggcgcggcacatcggccgcatcgtgggcggtgtgcgg
cgcttgttcgacctcgatgcccgcccggatctgatcgacgcccatctgcccgaattcgcc
gccgaggcgcccggcctgcgcattcccggcgccttcgacgggttcgagatcgccatgcgc
gccgtggtcggccagcagatcggcctgccgcaggcgcgcctcattcttggccgcctggcg
cagcgtcacggcacctccgtgcccgatgcgcccgacggtttgcgccgcaccttgcccgac
gcggccacgctcgccgcctgcacccccgaggcgctgcgcgcctgcggcctgaccggcgcc
cgcgccctcagcctgcacgcgctggcgctggccgtggccgagggacgcgtggcgctgcag
ccgctcgccccggtcgagcccacgcttgcggcgctgcaggccctgcccggcatcggtgac
tggacggcgcagctgattgcgctgcgcggtctgggctggccgaatgcctttcccgccggc
gatctggtgttgcgcaaacaactcggcctggcccgtccggccgacatgctggcccatgcc
gcgcgctgggcgccgtggcggggctatgccgcggtgcatctgtggcgccgcgcgactgaa
ggagaaacatcgtga
DBGET
integrated database retrieval system
