Thiomonas intermedia: Tint_0646
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Entry
Tint_0646 CDS
T01227
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tin
Thiomonas intermedia
Pathway
tin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tint_0646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tin03019
]
Tint_0646
03110 Chaperones and folding catalysts [BR:
tin03110
]
Tint_0646
03029 Mitochondrial biogenesis [BR:
tin03029
]
Tint_0646
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tin04147
]
Tint_0646
Enzymes [BR:
tin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Tint_0646
Messenger RNA biogenesis [BR:
tin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Tint_0646
Chaperones and folding catalysts [BR:
tin03110
]
Heat shock proteins
HSP60 / Chaperonin
Tint_0646
Mitochondrial biogenesis [BR:
tin03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Tint_0646
Exosome [BR:
tin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tint_0646
Exosomal proteins of other body fluids (saliva and urine)
Tint_0646
Exosomal proteins of breast cancer cells
Tint_0646
Exosomal proteins of colorectal cancer cells
Tint_0646
Exosomal proteins of bladder cancer cells
Tint_0646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5881
Motif
Other DBs
NCBI-ProteinID:
ADG30046
UniProt:
D5X6B9
LinkDB
All DBs
Position
695505..697145
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVIFGADARARMVEGVNILANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGI
DKAVTTLVEQLKKASKPCSTSKEIAQVGSISANSDANVGQIIAEAMDKVGKEGVITVEDG
KSLENELDIVEGMQFDRGYLSPYFINNQDKQVAVLENPYVLLHDKKISNIRDLLPALEQV
AKASRPLLIIAEDVEGEALATLVVNSIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGKV
IAEEVGLTLEKVTLADLGQAKRIEVGKENTIIIDGAGVAADIEARVKQIRIQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RARQAVGEIKGDNHDQEAGIKIVLRAIEQPLREIVANSGGEPSVVINKVLEGKGNFGFNA
ANDTYGDMLEMGIIDPTKVTRTALQNAASVAGLMLTTECMVAEAPKDESAPAMPGGGMGG
MGDMGM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagacgtgatttttggtgcggacgcccgcgcccgcatggtggaaggcgtg
aacattctcgccaacgctgtcaagacgaccctgggccccaagggccgcaatgtggtgctc
gagcgctcgttcggcgcccccaccgtgaccaaggacggtgtgtccgtggccaaggaaatc
gagcttaaggacaagttgcagaacatgggcgcgcagatggtcaaggaagtcgcttccaag
acctccgataacgccggtgacggcaccaccaccgccaccgtgctggcccaagccatcgtg
cgcgaaggcatgaaatatgtggccgccggcatgaacccgatggacctcaagcgcggcatc
gacaaagcggtcaccacgctggtggaacagttgaagaaagcgtccaagccctgctcgacg
agcaaggaaatcgcgcaggtcggctccatctcggccaacagcgatgcgaatgtcggccag
atcatcgctgaggcgatggacaaggtgggcaaggaaggtgtgatcaccgtcgaagacggc
aagagcctggaaaacgagctcgacatcgtcgaaggcatgcagttcgaccgcggctatctg
tcgccctacttcatcaacaaccaggacaaacaggttgcggtgctcgaaaatccctacgtg
ctgctgcacgataaaaagatttccaacatccgcgacctgctgcccgcgctggagcaagtg
gccaaggccagccgtccgctgctgatcattgccgaagacgtggaaggcgaagcgctggct
accctggtggtcaacagcatccgcggcatcctcaagaccgtggccgtcaaggcgccgggc
tttggtgaccgtcgcaaggccatgctggaagacatcgccatcctcaccggcggcaaggtg
atcgccgaagaagtcggcctgacgctggagaaggtgacgctggccgatctgggtcaagcc
aaacgcatcgaagtcggcaaggaaaacaccatcatcatcgatggcgctggcgtggccgcc
gacatcgaagcgcgcgtcaagcagatccgcatccagatcgaggaagccacctcggattac
gaccgcgaaaagctgcaagagcgcgtggccaagctggctggtggtgtggccgtcatcaag
gtcggcgccgccaccgaagtggaaatgaaggagaagaaagcccgcgtggaagacgccctg
cacgcgacccgtgctgcggtggaagaaggcattgtggctggcggtggcgtggcgctgctg
cgtgcccgtcaggctgtaggcgagatcaagggcgacaaccacgatcaggaagccggcatc
aagatcgtgctgcgtgccattgaacagccgctgcgcgaaatcgttgccaactccggtggc
gaacccagcgtggtgatcaacaaggtgctcgaaggcaagggcaattttggcttcaatgcc
gccaatgacacctacggcgacatgctggaaatgggcatcatcgacccgaccaaggtcacc
cgcaccgcgctgcagaacgcggcgtcggttgccggcctgatgctcaccaccgagtgcatg
gtggccgaggcgccgaaggacgagagcgcacccgccatgcccggcggcggcatgggcggc
atgggcgacatgggcatgtaa
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