Thiomonas intermedia: Tint_0658
Help
Entry
Tint_0658 CDS
T01227
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tin
Thiomonas intermedia
Pathway
tin00300
Lysine biosynthesis
tin00470
D-Amino acid metabolism
tin01100
Metabolic pathways
tin01110
Biosynthesis of secondary metabolites
tin01120
Microbial metabolism in diverse environments
tin01230
Biosynthesis of amino acids
Module
tin_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Tint_0658
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Tint_0658
Enzymes [BR:
tin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Tint_0658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
CbiG_C
DUF4749
Motif
Other DBs
NCBI-ProteinID:
ADG30058
UniProt:
D5X6D1
LinkDB
All DBs
Position
complement(710480..711772)
Genome browser
AA seq
430 aa
AA seq
DB search
MKTLLLPALPGHPHIAYVGSTLKIEQVTASAVAAEFGTPTYVYSRASIEEAAQRYSQAAQ
ASPVHVALRYAVKANSNLAVLQLLARLGWGFDIVSAGELKRVLAAGGEAGKVVFSGVGKS
ADDMRFALDVGVECFNVESPSELAALNRVAQAAGKVARVALRVNPDVDAGTHPYISTGLK
TNKFGISQDQAAQLALQTAQFEQVQLVGIACHIGSQITTVEPYLDALDKVLDLVEQMERK
GAKIEHIDLGGGLGIRYTDETPPTPQEWLSPLLARISARGFGHRTIVIEPGRSIVGNAGV
LLTRTLFLKSTPVKHFAVVDAGMNDLIRPALYSAEQAVVPAEQREGSALKYDIVGPVCES
ADWLARDRALVLAEGDLLAILSSGAYGMVMASNYNSRGRPAEVMVDGATATLIRPRETPE
QLYASERLLP
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccttgctcctccctgccctgcctgggcatccccacatcgcctatgtcggctcg
accttgaagatcgagcaagtcaccgcctctgccgtggcggctgaattcggcaccccgacc
tatgtctattcgcgcgcctcgatcgaagaggcggcgcaacgctatagccaagcggcgcag
gccagcccggtgcacgtcgccctgcgttacgcggtgaaggcgaactccaacctggcggtg
ctgcagctgctcgcgcgcctgggctggggcttcgacatcgtttcggcgggtgaactcaaa
cgggtattggctgcagggggcgaagcgggcaaggtggtgttttccggcgtgggcaagtcg
gccgacgatatgcgctttgcgctcgatgtcggcgtggagtgcttcaacgtcgagtcgccc
agcgagttggccgcgctcaaccgggtcgcacaggccgcgggcaaagtcgcgcgtgtggcg
ctgcgcgtcaacccggacgtcgacgccggtacgcatccctatatttccacgggcctgaaa
accaacaaattcggcatctcgcaagatcaggctgcgcaacttgcgctgcagactgcgcag
ttcgagcaagtgcaactagtgggcatcgcctgtcacatcggctcgcagatcacgaccgtc
gaaccctatctggacgcgctagacaaggtgctcgatctggtggagcagatggagcgcaaa
ggcgcgaaaatcgagcacatcgatctcggcggcggtttgggcatccgctacaccgacgaa
accccgccaacgccgcaggagtggctgagcccgctgctggcgcgcatctcggcgcgcggt
ttcggtcatcgcaccatcgtgatcgagcccggtcgttccatcgtcggcaatgccggcgtg
ctactcacgcgcaccctgtttctcaaatccaccccggtcaaacactttgccgtggtcgat
gccggcatgaacgatctgatccgccccgcgctttactcggccgagcaggccgtcgtcccc
gccgagcaacgggaaggcagcgccttgaaatacgacatcgtcggcccggtgtgcgaatcg
gccgactggctggcgcgcgaccgcgcgctggtgctggcggaaggcgatctgctggccatt
ttgtcgagcggcgcctacggcatggtgatggcgtccaattacaacagccgcggccgcccc
gccgaagtgatggtcgacggcgccaccgccacgctgattcgtccgcgcgaaacgcccgaa
caactctacgccagcgaacggctcttgccctga
DBGET
integrated database retrieval system