Thiomonas intermedia: Tint_1027
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Entry
Tint_1027 CDS
T01227
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tin
Thiomonas intermedia
Pathway
tin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tint_1027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tin03019
]
Tint_1027
Enzymes [BR:
tin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Tint_1027
Messenger RNA biogenesis [BR:
tin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Tint_1027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
ADG30421
UniProt:
D5WZK5
LinkDB
All DBs
Position
complement(1098463..1099899)
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AA seq
478 aa
AA seq
DB search
MIRKFISRLFTANKAETNPQNRGQRRDLPRAQHQIDASRLSQNARNTVQTLQQAGFEAYI
VGGAVRDLLLGLKPKDFDVATNATPEQVKPLFKRAFIIGRRFRIVHVMYGRDIIEVSTYR
ALHDAQAAESVDGNERTSRRALADKTLAVDSSGRVLRDNVWGTLDDDAERRDFTINALYY
DPIRDVVVDYHRGMKDLKERRLRMIGDPAARYREDPVRMLRIARFAAKLGFDIDPATLAP
IGPSADLLANVPAARLFDETIKLLQTGHAVASLQQLRRLGLHHGLLPLLDPVLEKPEGER
FITNALQDTDERIAQGKTASPSFLFACLLWHDVEQRWNALLAEGIAPLMALDQAADEVLA
AQAERLAIQRRIATDMREIWSLQSRFERRTPRYANSLVEHPRFRAAYDFLSLRARSGQAE
PELVQWWEAFQFADAEGRADMLATAPQPSAASKPRRRRRRKKPCEANPADGASNDSSE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcaaattcatcagtcgcctgttcaccgcgaacaaagccgaaaccaacccgcaa
aaccgtggccaacgccgcgacctgccccgcgcccagcaccaaatcgacgccagccgcctt
tcgcagaacgcccgcaacaccgtgcagaccctgcagcaggcgggcttcgaggcctacatc
gtcggcggcgcggtgcgcgatctgctgctgggcctcaagcccaaagacttcgacgtcgcc
accaatgccacgcccgagcaggtcaagccgctgttcaagcgcgctttcatcatcggccga
cgctttcgcatcgtgcacgtcatgtatggccgcgacatcatcgaagtgtccacctaccgc
gccctacacgatgcgcaagccgccgagtccgtggacggcaacgagcgcacctcgcgccgc
gcccttgccgacaagaccctggcggtggacagcagcggccgcgtgctgcgcgacaacgtc
tggggcacgctcgacgacgatgccgagcgccgcgacttcaccatcaacgcgctctattac
gacccgatccgcgacgtggtggtcgactaccaccggggcatgaaagacctcaaagagcgg
cgcctgcgcatgatcggcgaccccgccgcccgctaccgcgaagacccggtgcgcatgctg
cgcatcgcccgcttcgccgccaaactcggcttcgatatcgacccggccacgctcgcgccc
atcggccccagcgccgatttgctcgccaatgtgccggccgctcgcctgttcgacgagacc
atcaagctgctgcagaccggccatgcggtcgcctcgctgcaacagctccgccgcctgggc
ctgcatcacggcctgctgccgctgctcgatcccgtgctggaaaaacccgagggcgagcgc
ttcatcacgaatgcgctgcaagacaccgacgagcgcatcgcccaaggcaagaccgccagc
cccagcttcctcttcgcctgcctgctttggcatgacgtggagcaacgctggaacgcgttg
ctggccgaaggcatcgcccccctcatggcgctcgatcaggccgctgacgaagtgctggcc
gcgcaggccgagcgcctggccatccagcggcgcatcgccaccgacatgcgcgaaatctgg
tcgctgcaatcgcgcttcgaacgccgcaccccgcgctatgccaacagtctggtcgaacac
ccacggtttcgcgctgcctacgactttctcagcctgcgcgcgcgcagcggccaggccgag
ccggagttggtgcaatggtgggaggctttccagttcgccgacgccgagggccgtgccgac
atgctcgccaccgcgccgcagcccagcgcagccagcaaaccccggcggaggcggcggcgc
aaaaaaccgtgtgaagcgaaccctgccgacggcgccagcaacgacagttccgagtga
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