Thiomonas intermedia: Tint_1039
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Entry
Tint_1039 CDS
T01227
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tin
Thiomonas intermedia
Pathway
tin03420
Nucleotide excision repair
tin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tint_1039
03430 Mismatch repair
Tint_1039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tin03400
]
Tint_1039
Enzymes [BR:
tin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tint_1039
DNA repair and recombination proteins [BR:
tin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tint_1039
MMR (mismatch excision repair)
Other MMR factors
Tint_1039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADG30433
UniProt:
D5WZL7
LinkDB
All DBs
Position
1111076..1113421
Genome browser
AA seq
781 aa
AA seq
DB search
MSALIQQLNPEQHAAVTLPAENALILAGAGSGKTRVLTTRIAWLISTGQVTPAGILAVTF
TNKAAKEMMARLSAQLPIPVRGMWIGTFHGLCNRFLRAHWREAGLPQTFQILDIQDQLAS
IKRLLKSLNVDDERHPPKQVQWFINGAKDQGLRPGDVEARDPQSRQLAEIYLAYEAQCTR
DGVADFAELMLRSYEILRDNAAIRSHYRQRFRHILVDEFQDTNRLQYQWLKLLAGPEDAQ
GACVFAVGDDDQSIYAFRGAHAGNMDDYQREFRVRHLIKLERNYRSHGHILDSANTLIAN
NARRLGKNLRTEAGAGEPVRVFEAPSDYAEAQWLIEEIRQLLREGLAHSEIAVLYRANAL
SRVIEGALFNAGLPYRVYGGLRFFERAEVKHALAYLRLLDNPQDDTAFLRVVNFPARGIG
ARTLEQLQDAARLRATPLSEAVDALGGRGAASLQAFLDLVAQMRFQTAAMSLPELVRHVL
EASGLNAHYREEREGQERLENLEELVNAAAAFVTQEGFGLQATAQQRQALGAAPDSFAAT
DGIDPATGETLSPLTAFLTHAALEAGDNQAQNGQDAIQMMTVHAAKGLEFDAVFITGLEE
GLFPHENALSETDGVEEERRLMYVAITRARKRLYLSLAQTRMLHGQTRYNLRSRFFDELP
TESLKWLSAKQPGFGGGFGTDQHSSWSYTPKVSVPSFTPATSNAGSPLSTGFSPAGVRGA
SQPGARSHGLRIGQAVFHNKFGEGVVLSLEGNGEDARAQVKFNRHGAKWLALNIAKLTPV
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccctcatccaacaactcaatcccgagcagcacgccgctgtcaccctgcctgct
gaaaatgccctgatcctcgccggcgccgggagcggcaaaacgcgggtgctcaccacgcgc
attgcttggttgatttccaccgggcaagtcacgcccgcaggcattctggccgtgaccttc
accaacaaggcggcgaaggaaatgatggcgcggttgtcggcgcaactgcccatcccggtg
cggggtatgtggatcggcacttttcacggtctgtgcaaccgctttctgcgggcgcactgg
cgcgaggccgggttgccgcagacttttcagattctcgacatccaggatcagctcgccagc
atcaaacggctgctcaagtcgctgaatgtggacgatgaacgccacccgcccaagcaggtg
caatggttcatcaacggcgccaaagatcagggtctgcgtccgggcgatgtggaagcgcgc
gatccgcaaagccgacaactggccgagatctatctggcctacgaggcgcaatgcacgcgt
gacggcgtggccgattttgccgagctgatgctgcgttcctacgagattctgcgcgacaac
gccgccatccgttcgcattaccgccagcgcttccggcacatcctggtggacgagtttcag
gacaccaaccgcctgcaataccagtggctcaaactgctcgccggaccggaggacgcgcag
ggcgcttgcgtgtttgccgtgggcgacgacgatcagagcatctatgcctttcgcggggcg
catgccggcaatatggacgattaccagcgcgagtttcgtgttcgccacctcatcaagctg
gagcgtaattaccgctcgcacggccacattctcgacagcgccaacaccctgatcgccaac
aacgcccgccgcctgggcaagaacctgcgcaccgaagcaggggcgggcgagccggtacgt
gtgttcgaggcgccgagcgactatgccgaagcccagtggctgatcgaggaaatccggcaa
ttgctgcgcgagggactggcgcatagcgagatcgccgtgctgtatcgcgccaacgcgctg
tcgcgggtcatcgaaggggcgctgttcaatgccggcctgccttaccgcgtgtatggcggt
ctgcggtttttcgagcgagcggaggtcaagcatgcgctggcctacctgcgcctgctcgac
aacccgcaggacgacaccgccttcctgcgcgtggtcaacttccccgcgcgcggcatcggc
gcgcgcactctggagcagttgcaagacgccgcccgtctgcgcgccacgccgctgagcgaa
gccgtggacgccctcggggggcgtggtgcagccagcctgcaggcctttctcgatctggtc
gcgcagatgcgctttcagaccgccgcgatgagcctgcccgaactggtgcgccatgtgctc
gaagccagcggcctcaacgcccactaccgcgaggaaagagagggtcaggagcggctggaa
aacttggaggaactggtcaacgccgctgccgccttcgtcacccaggaaggctttggccta
caggcgacggcgcagcagcgtcaggcgcttggagccgcgcctgacagcttcgccgccaca
gacggcatcgaccccgccaccggcgaaaccctctcgccgctgaccgcctttctcacccac
gccgcgctcgaagccggcgacaaccaggcgcagaacggacaggacgccattcagatgatg
accgtccacgccgccaagggactggagttcgacgccgtgttcattaccgggctggaagaa
ggcttgttcccgcacgaaaacgcgctgagcgaaaccgatggcgtggaagaagagcgtcgg
ctgatgtatgtggccatcacccgcgcgcgcaagcgtctctacctcagtctggcccagacc
cgcatgctccacggccagacgcgctacaacctgcgcagccggttctttgacgaacttccg
accgaatcgctcaagtggctcagcgccaaacagccggggttcggcggcggtttcggtacc
gatcagcacagcagttggagttacaccccgaaagtgtcggtgccgtcattcacgcccgcg
acttccaacgccggatcacccttaagcactgggttttctccggcaggcgttaggggggcg
agtcagcccggagcgcgctcgcacggcctgcgcatcggtcaggccgtgtttcacaacaaa
ttcggtgagggcgtcgtgctcagcttggaaggcaacggcgaagacgccagagcccaagtc
aagttcaaccgccacggcgccaagtggctcgcgctgaacatcgccaaactcacgcctgtg
aattag
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