Thiomonas intermedia: Tint_1160
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Entry
Tint_1160 CDS
T01227
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K02405
RNA polymerase sigma factor FliA
Organism
tin
Thiomonas intermedia
Pathway
tin02020
Two-component system
tin02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Tint_1160
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tint_1160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tin03021
]
Tint_1160
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tin02035
]
Tint_1160
Transcription machinery [BR:
tin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tint_1160
Bacterial motility proteins [BR:
tin02035
]
Flagellar system
Flagellar assembly proteins
Stator
Tint_1160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
GerE
HTH_37
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
ADG30550
UniProt:
D5X0A4
LinkDB
All DBs
Position
1235685..1236437
Genome browser
AA seq
250 aa
AA seq
DB search
MKPGLYPAPETREERLSKHLPMVRRIAGQMAAQLPASVDFSDLEQAGMIGLWDALDRGEM
QSPAQFATYAAIRIRGAIYDELRKLDWLPRRSRAKERQIERAEQLLTQRLGRHPEDGELA
AHLGWELAEYYDALAETSMQLVYLEDLTHDDGGDYADRKADEASLLPEELLQDAQLERDL
QAAIADLPEREKLVLSLYYQEDLQLKDIGRVLEVSESRVSQLMKQAVMRLRARLQAHQHS
ASGAGRRAAP
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccggcctctatcccgcccctgaaacccgcgaggagcgcctgagcaagcatttg
cccatggtgcggcgcatcgcgggccagatggcggcgcaactgccagcctcggtcgatttt
tccgatctggaacaggccgggatgatcggcctgtgggacgcgctcgaccgcggcgaaatg
cagtcgccggcgcagttcgcgacctacgccgccattcgcattcgtggcgcgatttacgac
gaactgcgcaagctcgactggctgccgcgccgcagccgtgccaaagagcgccagatcgag
cgcgccgagcagctgcttacgcagcgcctgggccgccatccggaagacggcgaactcgcc
gcgcatctgggctgggaactggccgagtattacgacgcgctggccgagaccagcatgcaa
ctggtctatctcgaagacctcacgcacgacgacggtggtgattacgccgaccgcaaggcc
gacgaagccagcctgctgcccgaagaactgctgcaggatgctcagctcgaacgcgatctg
caggccgccattgccgacctgcccgagcgcgagaagctggtgctgtcgttgtattaccag
gaagacctgcagctcaaagacattggccgggtgctcgaagtgagcgaatcgcgggttagc
cagctcatgaaacaggcggtgatgcgactgcgcgcgcggctgcaggcgcatcagcattca
gccagcggtgcgggccgccgcgccgcgccataa
DBGET
integrated database retrieval system
