Thiomonas intermedia: Tint_1248
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Entry
Tint_1248 CDS
T01227
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tin
Thiomonas intermedia
Pathway
tin03030
DNA replication
tin03410
Base excision repair
tin03420
Nucleotide excision repair
tin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tint_1248
03410 Base excision repair
Tint_1248
03420 Nucleotide excision repair
Tint_1248
03440 Homologous recombination
Tint_1248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tin03032
]
Tint_1248
03400 DNA repair and recombination proteins [BR:
tin03400
]
Tint_1248
Enzymes [BR:
tin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tint_1248
DNA replication proteins [BR:
tin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Tint_1248
DNA repair and recombination proteins [BR:
tin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Tint_1248
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tint_1248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADG30636
UniProt:
D5X0J0
LinkDB
All DBs
Position
1331986..1334790
Genome browser
AA seq
934 aa
AA seq
DB search
MRRFYGGIDNARMNSDVQSDSAPTLLLVDGSSYLYRAFHAMPDLRGPEGQPTGALYGMVA
MLRRLREQYPVAKGYRYAACVFDAKGPTFRNAMYDQYKAQRPPMPPDLVAQIEPIHQAVR
LMGWPLLEVPGVEADDVIGTLAVRAHAQGIRTLVSTGDKDMAQLVNDHITLVNTMSNEVL
DPAGVQQKFGVPPDRIVDYLTLVGDAVDNVPGVDKVGPKTAVKWLTEYGSLDALIEQAET
VSGAAGKNLRAALDWLPTARKLVTIHTDCDLDGYAKAFDPDLRPAPEDAQALLPFFTSNG
MRRFSAEMKAQTVSEQAARQVSLLDGAPAAEKSAPGTYETVLDCDRFDAWLTRIDAAELT
AIDTETDSLDPMRARLVGISLSVAPGEAAYLPLAHAYPGAPEQLPMAEVLERLRPWLENA
DKPKLGQNAKYDRHVFANAGVTIRGYAHDTLLESYVIEAHKPHSLDSLVSRHLGRDDTLS
YEQVCGKGTKAITFDQVALDVATRYSGEDADLTLQVHQRLWPQIQADAGLTRIYALEMQV
SEVLQRIERTGVLVDGDLLRAQSGELGAKMQTLEAQAFELAGGAFNLGSPKQIGEILFDR
LQLPVQKKTASGAPSTDEEVLEKLAEDYPLPRVILDHRSLSKLKSTYTEKLPQMINPDTG
RVHTNYAQAVAVTGRLASNDPNLQNIPVRTAEGRRIREAFIAPKGWLIASSDYSQIELRI
MAHLSQDAGLLAAFAAGEDIHRATAAEIFGVTPLEVSSDQRRMAKVINFGLIYGMSAFGL
ARNLGLERSAAQLYIDRYFARYPGVAAYMERTRKLAAEQGYVETVFGRRLWLPDIHASGP
RRAAAERAAINAPMQGTAADLIKMAMIAVDAALMREKLRSRVVMQVHDELVLEVPEEETH
WVREHIPRLMAGVAQLDVPLLAEMGLGANWELAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgattttacggcggcattgataatgcgcggatgaattccgacgtgcaatccgac
tccgcccccaccctgctgctggtggatggttccagctatctctaccgcgccttccacgcc
atgcccgacctgcgcgggcccgaaggccagcccaccggggcgctctacggcatggtggcc
atgctgcggcgcctgcgcgagcaatatcccgtggccaagggctatcgctacgcggcctgc
gtgttcgacgccaaggggccgacattccgcaacgccatgtacgaccaatacaaggcgcag
cgtccgccgatgccgcccgacttggtggcgcagatcgagccgattcaccaagctgtgcgg
ttgatgggctggccgctgctggaggtgccgggagtggaggccgacgacgtgatcggtacc
ctggccgtgcgggcgcacgcacagggcatacgcaccctggtctccacgggcgacaaggac
atggctcagctggtcaacgaccacatcaccctggtcaacaccatgagcaacgaggtgctc
gaccccgccggggtgcagcaaaagttcggcgttcccccagatcgcatcgtcgattacctc
accctggtaggcgacgcggtggacaacgtgcccggcgtggacaaggtcggccccaagacg
gcggtcaagtggctgacggagtatggctcgctcgatgcgctgatcgagcaggccgaaacc
gtgagcggtgctgcgggtaaaaacctgcgtgccgcgctcgactggctgcccacggcgcgc
aagctggtgactatccacaccgactgcgatctggacggctacgctaaagccttcgatccc
gatctgcgcccagcgccggaagatgcgcaggcgctgctgcccttcttcaccagcaacggc
atgcgccgcttcagcgccgagatgaaggcgcagacggtgagcgagcaggccgcccgccag
gtgtcgctgctggacggcgcgccggccgccgaaaagagcgcgccaggcacctacgagacc
gttctcgactgcgaccggttcgacgcctggctgacccgcatcgacgcggccgagctcacc
gccatcgacaccgaaaccgactcgctcgacccgatgcgcgcacggctggtcggcatttcg
ctcagcgtcgcgcccggcgaggccgcctatttgccgttggcccacgcctaccccggcgcg
cccgagcagttgcccatggccgaggtgctcgaacgtctgcggccctggctggaaaacgcc
gacaaacccaagctcgggcagaacgccaagtacgaccgccatgtgttcgccaacgcgggc
gtgacgattcgcggctatgcgcacgacaccttgcttgagagctatgtgatcgaggcgcac
aagccgcacagcctcgacagtctggtgagccgccacctcggccgggacgacacgctgagc
tacgaacaggtctgcggtaagggtaccaaggccatcaccttcgatcaggtggcgctcgat
gtggcgacgcgctattccggcgaagatgccgacctcaccctccaagtgcaccagcggctt
tggccgcaaatccaggccgatgccgggctgacgcgcatttacgcgctggaaatgcaggtc
agcgaagtgctgcagcgcatcgagcgtaccggcgtgctggtggacggcgatctgctgcgg
gcgcaaagcggcgagctgggcgccaagatgcaaaccctggaagcgcaggcattcgagctg
gccggcggcgctttcaatctgggcagtcccaagcagatcggcgaaatcctgttcgaccgc
ctgcaactgccggtgcagaaaaaaaccgcctccggcgctccgtccaccgacgaggaagtg
ctggaaaagctggccgaagattacccgctgccgcgcgtcattctcgaccaccgcagcctg
tccaagctcaagagcacctacaccgagaagctgccgcaaatgatcaacccggacaccggc
cgggtgcacaccaactacgctcaggccgtggccgtgaccgggcggctggcctccaacgat
ccgaatctgcagaacattccggtacgcacggccgaggggcggcgcattcgcgaggcgttt
atcgcgcccaagggctggctgatcgcgtcgagcgactactcgcagatcgagctgcgcatc
atggcgcacctctcgcaagacgccggtctgctcgctgcgttcgccgccggggaagacatt
caccgcgcgaccgcggctgagatttttggcgtcacgccgctggaagtcagcagcgatcag
cgccgcatggccaaggtcatcaacttcgggctgatctacggcatgagcgccttcggcctg
gcacgcaacctcggcctggaacgcagcgcagcgcagctctacatcgaccgctacttcgcc
cgttatccgggtgtcgcggcgtatatggagcgcacccgcaagctggcggcggagcagggc
tatgtcgaaaccgtgttcgggcgacgactgtggctgcccgatatccacgccagcgggccg
cgccgggccgcggccgagcgcgcagccatcaacgcgccgatgcagggcaccgcggccgac
ctcatcaagatggcgatgatcgccgtcgatgccgcactcatgcgcgaaaaactgcgcagc
cgggtggtgatgcaggtgcacgacgagctggtgctcgaagtgcccgaggaagaaacgcac
tgggtgcgcgaacacattccccgcctgatggcgggcgttgcccagctcgacgtcccgctg
ctggccgaaatgggcctgggcgccaactgggagctggcgcactga
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