Thiomonas intermedia: Tint_1326
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Entry
Tint_1326 CDS
T01227
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tin
Thiomonas intermedia
Pathway
tin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tint_1326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tin03400
]
Tint_1326
Enzymes [BR:
tin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Tint_1326
DNA repair and recombination proteins [BR:
tin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Tint_1326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ADG30713
UniProt:
D5X0R7
LinkDB
All DBs
Position
1425283..1426086
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AA seq
267 aa
AA seq
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MLPFPLRVTTLNLNGIRSAANKGVDDWLRSQARPDVLCVQELKALEADMTPGLRTLGGLH
GAAFQHAEKPGYSGVGLYWKHEPDDVRIGFGHAEFDAEGRYVEAIYKRPGGGRLSIVSAY
FPSGSSSEERQQAKFRFLADFYEHLLALKAAGEVLLCGDVNIAHKEIDLKNWKGNLKNSG
FLPEERAWMTRLIDEAGYVDVFRQLDPAPDRYTWWSNRGQARAKNVGWRIDYHLATPGIA
AQAKSDSAWIYTEQRFSDHAPLTIDYA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctttccccttgcgcgtgaccactctgaatctcaatggcatacgttccgccgcg
aacaagggggtcgatgactggctgcgctcgcaggcgcgcccggatgtgctctgcgtgcag
gaactcaaagcgctggaagccgatatgacgcctggcctgcgtaccttgggtggattgcac
ggggccgcatttcagcacgccgagaagcccggctacagcggcgtcggcctctattggaag
cacgaacccgatgacgtgcgcatcggttttggccatgccgagttcgacgcggaagggcgc
tatgtcgaagccatttacaagcgcccgggcggcgggcgtctatccatcgtgtctgcctac
ttcccctcgggctccagctccgaggagcgccagcaggcgaaatttcggttcctggccgat
ttctacgaacaccttctggccctgaaggccgcaggcgaggtgctgctgtgcggcgatgtc
aacatcgcccacaaagagatcgacttgaagaattggaaaggcaacctcaagaacagcggc
ttcctgccggaagagcgcgcctggatgacccgactgattgacgaggcgggctatgtggac
gtgtttcgccaactcgaccccgcgccagatcgctacacttggtggagcaatcgcgggcag
gcccgagcgaaaaacgtgggatggcgcatcgactatcacctggccactcccggcatcgcg
gcgcaggctaaatcggatagcgcctggatttacacggagcagcgattttcagatcatgct
ccactaactatcgactacgcctga
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