Thiomonas intermedia: Tint_1362
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Entry
Tint_1362 CDS
T01227
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tin
Thiomonas intermedia
Pathway
tin03030
DNA replication
tin03430
Mismatch repair
tin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tint_1362
03430 Mismatch repair
Tint_1362
03440 Homologous recombination
Tint_1362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tin03032
]
Tint_1362
03400 DNA repair and recombination proteins [BR:
tin03400
]
Tint_1362
Enzymes [BR:
tin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tint_1362
DNA replication proteins [BR:
tin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tint_1362
DNA repair and recombination proteins [BR:
tin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tint_1362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ADG30749
UniProt:
D5X0V3
LinkDB
All DBs
Position
complement(1462691..1463410)
Genome browser
AA seq
239 aa
AA seq
DB search
MTRQIVLDTETTGLNPASGDRIIEVAGVELFNRRLTGKHYHAYLNPDRASHPDALKVHGL
TEEFLSDKPRFEQIADDLLEFVRDAEVIIHNAPFDCAFLDAELERLNRPAFRQHVPLVTD
TLAMAKLQFPGKFNNLDALCKRFGIDNTHRTLHGALLDAELLAEVYLSLTRGQESLVIDL
ETPQQQMSVASHRLDHFSLPVRAPSSDEQAAHEAFLQLLDKKSQGKSIWRPGAEASQNS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgacacgccaaatcgtcctcgacaccgagaccaccggcctcaatcccgccagcggcgac
cgcatcatcgaagttgccggagtcgaactgttcaaccgcaggctgacgggcaagcactac
cacgcctacctcaacccggaccgcgccagccaccccgacgccctcaaagtccacggactc
accgaagaatttctctccgacaagccgcgcttcgagcagatcgccgacgacctgctcgag
tttgtgcgcgatgccgaagtcatcattcacaacgcccccttcgattgcgccttcctcgac
gccgaactcgagcgactcaaccgtcccgccttcaggcaacacgtcccgctggtcaccgat
acgctggcgatggccaagctgcagttccccggtaagttcaacaacctcgacgccctgtgc
aagcgtttcggcatcgacaacacgcaccgcaccctgcacggcgcgctgctagacgccgaa
ttgctcgccgaggtctatctcagtctcacgcgaggccaagaaagcctggtcatcgatctg
gagacgcctcaacaacagatgagcgtggcttcgcaccgactcgatcatttttccctgccc
gttcgcgcccccagcagcgacgagcaagccgcgcatgaagcgtttctgcaattgctcgac
aaaaaaagccaaggcaagagcatctggcgtccgggcgcggaggcgagccaaaacagttga
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