Thiomonas intermedia: Tint_1375
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Entry
Tint_1375 CDS
T01227
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tin
Thiomonas intermedia
Pathway
tin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Tint_1375
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tin01007
]
Tint_1375
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tin03016
]
Tint_1375
Enzymes [BR:
tin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Tint_1375
Amino acid related enzymes [BR:
tin01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Tint_1375
Transfer RNA biogenesis [BR:
tin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Tint_1375
Prokaryotic type
Tint_1375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
B5
FDX-ACB
Motif
Other DBs
NCBI-ProteinID:
ADG30762
UniProt:
D5X0W6
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All DBs
Position
1476860..1479301
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AA seq
813 aa
AA seq
DB search
MQFPESWLRQFCNPDLSTEALADTLTMAGLEVEEVQAAAPAFSGVVVGLVRDVQPHPNAD
KLRVCQVDVGAAQWLQIVCGAPNVAVGMAAPCALVGAELPPQQEGQGAFRIGPAKMRGVE
SQGMLCSARELGLSADHAGLLALQGAPQAGADLREWLSLDEAVFTIKLTPNLGHCLSIIG
VAREVSAVTGAVFHRPTFRPVAPTLADRLPVSIEAPDLCGRFSGRIIRGVNARAETPQWM
KTRLERSGQRSISALVDISNYVMLELGRPSHVFDLAKIRGGLTVRWAREGEQLELLNGQT
ISLSADMGVIAAENGVESLAGIMGGESTAVTLNTTDIYLEAAFWWPDAIRGRARRLNFST
DAAARFERGVDYATTVEHLDAITALILDICGGQAGPADDQITQLPQRKPVRMRVARCEKV
IGIPIGSDRMGEIYSRLGLQAELDRNSTEPAWIVTPGAERFDLEIEEDLIEEVARIHGYQ
HIPTQAPVARLHPLPVPEGQRTLHSLRLKTAALGYQETLNFSFVDAQSEQDFAGQADPIR
LLNPIASQMSVMRSTLIGSLVKVLADNLNHRAKRVRLFELGRVFARDAQAENGPMQVAGI
RQPMRLAGLAYGSVVPVQWAEPERRVDFYDMKADVEALCEGSGEGTGELQWMPVQHPALH
PGRSAEVRLGGERLGVVGELHPQWVQRYHLQFAPVIFELDAGLLQAQRLPVFVPINRVPA
VQRDLAFQVPSGVSYAQMQQAVQTAIQNIPVCGIIREVRLFDLFTPPGDTTSKSMAFRLQ
LQDQQTLTDERVDAACQALVAELATATGAQLRG
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttcccgaatcctggttgcgccagttttgcaatcccgacctctcgaccgaagcg
ctggccgataccctgaccatggcgggtctggaagtggaggaagtgcaagccgcggcaccc
gctttttcgggcgttgtagtggggctggtgcgtgatgtgcagcctcatcccaatgccgac
aaacttcgtgtttgccaggtggatgtcggcgcggctcaatggctgcaaatcgtctgcggt
gcgcccaatgtggccgtcggcatggccgcgccctgtgcgctggtgggggccgaactgccg
ccgcagcaagaggggcagggcgcgttccgcatcgggccggccaagatgcgcggtgtggaa
tcgcagggcatgctgtgctccgcgcgcgaactgggcctatcggccgatcatgccggtttg
ctggcgcttcaaggagcaccgcaggccggggcggatctgcgtgaatggctctcgcttgac
gaagcggtgttcaccatcaagctcacgccgaatctggggcattgcctgagcatcatcggt
gtcgcccgtgaggtgtctgcagtcacaggcgcggtgttccacagaccgacgttcaggccc
gtggcgcccactctggcggaccgattgccggtgagcattgaagcgcccgatctctgcggg
cggttttccggccgcatcatccgcggggtgaatgctcgggccgaaacaccgcaatggatg
aaaacgcggctggaacgcagcggacagcgaagcatttcggctctggtcgacatttccaac
tatgtgatgctggagttgggccgcccgagtcatgtgttcgatctggccaagattcgcggc
ggattgaccgtgcgctgggcgcgcgaaggcgagcagcttgaattgctcaacgggcagacc
atctccctgagcgccgacatgggggtgattgccgccgaaaacggcgtggaatctcttgcc
ggcatcatgggtggcgagtccaccgccgtcaccttgaacaccacagacatctacctcgag
gccgcattctggtggccggacgccattcgtggccgcgcccgccgtctgaacttttctacc
gatgcggccgcccgcttcgagcgcggggtcgactacgcgaccaccgtcgagcacctcgat
gccatcaccgcgctgattctggacatctgcggcggacaagcgggcccggccgacgatcag
atcacccaactgccgcagcgcaaaccggtgcggatgcgggtggcgcggtgcgagaaagtc
atcggcattcctatcggctcagaccgcatgggcgagatttattcgcggctcgggcttcag
gccgaactcgaccgcaacagcactgaacccgcctggatcgtgacgccaggcgctgaacgt
ttcgatctggagattgaagaagatctgatcgaagaagtcgcacgcattcacggctatcag
cacattccaacccaggcgccggtggcgcgcctgcatccgctgccggtgcccgagggccag
cgcactttgcacagcctacgtctgaaaaccgcggccctgggctatcaagagaccctcaat
ttctcttttgtggatgcgcaatcggagcaggatttcgcgggtcaggctgaccccatccgc
ctgctcaatcccatcgcgtcacagatgtcggtgatgcgctccacgcttatcggctcactg
gtcaaggtgctggcagacaacctcaaccaccgtgccaaacgggtgcggctgtttgaactc
ggtcgcgtgtttgcgcgcgatgcgcaggccgagaacgggccgatgcaggttgcgggcatt
cgccagccgatgcgcctggcgggtctggcctatggctcggtggttcccgtgcagtgggcc
gagccggaacgccgggtcgatttctacgatatgaaggcagatgtcgaggccttgtgtgag
ggctcaggcgagggcacgggcgagttgcaatggatgccggttcaacatcccgccttgcat
ccggggcgcagcgcggaagttcggctgggcggtgagcgcctgggtgtggtgggagaattg
catccgcaatgggtgcagcgctatcacctgcagtttgcacccgtgatcttcgagctggat
gccgggctgttgcaggcccagcgactgcccgtgtttgtccccatcaaccgcgtacccgcc
gtgcagcgcgacctggcgtttcaggttccttcgggcgtcagctatgcgcagatgcagcag
gcagtacaaaccgccatccagaacattccggtttgcggcatcatccgggaggtgcgactc
ttcgacctgttcaccccgcccggagacacgacctcgaaaagcatggccttccgtctgcag
ctgcaagaccagcaaaccttgactgacgagcgggtggatgccgcctgtcaggcgttggtt
gccgagttggcgactgcaaccggggcacaactcaggggttga
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