Thiomonas intermedia: Tint_1681
Help
Entry
Tint_1681 CDS
T01227
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
tin
Thiomonas intermedia
Pathway
tin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Tint_1681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tin03400
]
Tint_1681
Enzymes [BR:
tin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Tint_1681
DNA repair and recombination proteins [BR:
tin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Tint_1681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
ADG31051
UniProt:
D5X1Q5
LinkDB
All DBs
Position
1803524..1804870
Genome browser
AA seq
448 aa
AA seq
DB search
MWTVSALVQAFSDALNARFNSLSVRGEISGLVRAASGHQYFNLKDGTAQLRCVWFRQRAG
SAATALRDGMSVRLRATVAIYEPRGDLQLIVESVQPDGEGALLEAFLRLKAKLQIEGLFD
SERKRPLPALPQAVGVITSLQAAALRDVLTTLRRRSPHVRVVVYPASVQGAAAPGELLAA
LQRAQARREVDLILLVRGGGSLDDLWAFNDEALTRAIAASTLPVISGVGHETDFTLADFV
ADLRAPTPTAAAELGVPAQAALLDALTHTAHRASSALSRHLQREQQRCDRLALRWPQPAA
LLATPQRHLAQLQWRLRQALNDLSRLHAQRLQLLQHRLAHALLQRAPRERERLNRCERGL
PEALSRQISNSQLRLDRAAQHLQLLSPRATLARGYLLGMNANGQVLRDLTQLAPQQPLLL
ADAQRAVRIDISRIDAQPHPLEADIPPN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtggacagtttctgctctggttcaggccttctcggacgccctcaacgcccgcttcaac
agcctgagcgtgcgtggcgaaatctcgggcctggttcgggccgcaagcggccaccagtac
ttcaacctcaaggacggcacggcgcaactgcgctgcgtctggttccgccagcgcgcaggc
tctgccgccaccgcgctgcgcgacggcatgagcgtgcggctgcgcgccaccgtggcgatt
tacgaaccccgcggcgacctgcagctcattgttgagagcgtgcagcccgacggcgagggc
gcgctgctcgaagcgtttttgcgcctcaaggccaaactgcagatcgagggtctgttcgac
tccgagcgcaaacgcccgctgccggccctgccgcaagccgtgggcgtgatcacctcgcta
caggccgctgccctgcgcgacgtgctcaccactctgcggcggcgcagcccccatgtgcgc
gttgtggtctatcccgccagcgtgcagggggccgcggcgcccggcgagctgctcgccgcc
ctgcagcgcgcacaggcgcggcgcgaagtcgatctcattctgctggtacgcggcggcggc
agcctcgacgatctctgggccttcaacgacgaggcgctgacccgggcgattgccgccagc
accctgccggtgatcagcggcgtgggccacgagaccgacttcaccctggccgatttcgtc
gccgatctgcgtgcgcccacccccaccgccgccgccgaactcggcgtgcccgcccaggcc
gcgttgctcgacgcgctcacccataccgcgcaccgcgccagcagtgcactcagccgccat
ctgcagcgcgaacagcagcgctgcgaccgcctcgccctgcgctggccgcaacccgccgcg
ctgctggccacaccgcagcgccacctcgcgcagttgcagtggcgactgcggcaggccttg
aacgacctgtcgaggctacatgcgcaacggctgcaactcttacagcaccgcctggcccat
gcgctgctccagcgcgcgccccgggaacgcgagcgcctgaaccgatgcgagcgcggcctg
ccagaagcactgtcgcgccagatttccaacagccagctccgccttgaccgggccgcgcag
catctgcaactcctcagcccgcgcgccaccctcgcgcgcggctacctgctgggcatgaac
gcgaacggccaagtgctgcgcgacctcacgcaactcgccccacagcagcccctgctgctg
gccgacgcgcaacgcgcagtgcggatcgacatcagccgcatcgacgcgcagccccatcct
ctcgaagcggacatcccaccgaattga
DBGET
integrated database retrieval system
