Thiomonas intermedia: Tint_1779
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Entry
Tint_1779 CDS
T01227
Name
(GenBank) RNA-binding S4 domain protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
tin
Thiomonas intermedia
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tin03009
]
Tint_1779
Enzymes [BR:
tin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Tint_1779
Ribosome biogenesis [BR:
tin03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Tint_1779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ADG31149
UniProt:
D5X203
LinkDB
All DBs
Position
complement(1908980..1910668)
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AA seq
562 aa
AA seq
DB search
MSSTDSPDSPELNPAPEAVADTPPARKTRAAPRRTPRKTAAASTEEGAAPESGEAVAPST
VEAVAASPAEPEAQSAESADAGAAEAAEASPQTEPLQSLEPKRAARPPRSPKNPRHQTEP
HAPQPGATAPAAAVAAPLVGVQIQDVISGTYDQAAETAEIVRRVLAPAEDAPKLHKVLAQ
SGVGSRREMEDLILAGRVSVNGEPAHLGQRILPTDQIRVNGKIIKRRLRPAQARVLAYHK
PTGEVVSFKDPEGRPTVFQHLPKLQGAKWTAVGRLDINTEGLLLFTTSGDLANRLMHPSY
GAEREYAVRVLGELDAAARDELLEGVQLGDGPARFLSLEEAGGEGANRWWRVVISEGRNR
EVRRMFEAVGLTVSRLIRVRYASVVLPAGLRRGDFVELDKSLVQALQGRSGEAPSGAGDR
PARRPNGQNQGGRRNDSRGSGRGGRGKGQGGDQQQPGPDSYARTTVEALFGKSPVVRSGG
GSWGGAGNFSTGNKPGGQSRRKSGSKQGSSQPDPMKTSFGYIHKDAGPHRAGGGGGPSGG
RRRSGGGGSGGGGNRGGNRGGR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagctctaccgactcgcctgactcccccgaactcaaccccgcgcccgaggccgtggcc
gatacgccgccagcgcgcaagacacgcgccgcccctcgccgcacgccgcgcaagactgcg
gctgcaagcaccgaagagggcgcagcgccggagtctggcgaagctgttgcgccgtccacg
gttgaagcggtggctgcttcgccggctgaacctgaagcgcaaagcgccgagagtgcagac
gccggcgcggcagaagccgccgaggcgagcccgcagactgagccgctgcagtcgcttgag
cccaagcgcgcggcgcgtccgccacgttcaccgaaaaacccgcgtcaccagaccgagccg
catgcgccgcagcctggcgcgacagcgcccgcagccgctgtggccgcgccgctggtgggc
gtgcagattcaggatgtgatttcgggcacctacgaccaggcggcggaaaccgccgagatc
gtgcgtcgcgtgttggccccggccgaagatgcgcccaagctgcataaggtgctggcgcaa
agcggcgtgggttctcggcgcgagatggaagacctcatcctggccgggcgggtttcggtc
aacggcgaaccggcgcatctgggccagcgcatcctgccgaccgaccagattcgcgtcaac
ggcaagatcatcaagcgccgcctgcggccggcccaggcccgcgtgctggcctatcacaag
ccgacgggtgaagtggtgtcgttcaaagacccggaagggcgtcccacggtgtttcagcat
ctgcccaagctgcaaggggccaagtggactgcagtcgggcggctggatatcaacaccgaa
ggcctgttgctgtttaccacctcgggcgacctggccaaccggctgatgcacccgagctac
ggtgccgagcgcgaatacgccgtgcgggtgctgggcgagcttgacgcggcagcccgcgac
gaattgctcgagggcgtgcagttgggcgatggcccggcgcgttttctgagtctcgaagag
gcgggcggcgagggcgccaatcgctggtggcgcgtggtcatctccgaggggcgcaaccgc
gaagtgcgtcgcatgttcgaggcggttgggctgacggtgagccgtctcatccgggtgcgc
tatgccagtgtggtgctgcctgcggggctgcggcgcggcgattttgtcgagctcgacaaa
tcgctggtgcaggcgctgcaaggccgcagcggcgaggcgccttcaggtgcaggagaccgc
cccgcgcgccgcccgaacgggcagaaccagggcggacggcgcaacgacagccgtggcagt
ggccgcggcggacgcggcaaggggcagggcggcgaccagcagcagcccgggccggacagc
tacgcccgcaccacggtcgaggcgctgttcggcaagagcccggtggtgcgtagcggcggt
ggttcctggggcggcgcaggcaatttctcgaccggaaacaaacccggcggacaatcgcgc
cgcaaatcgggcagtaagcagggcagttcgcagcccgatccgatgaagaccagtttcggt
tacatccacaaagatgccgggccgcatcgcgcgggcggtggcggcggcccctcggggggg
cgccgacgcagcggcggtggaggtagtggtggcggtggcaatcgcggcggcaatcgcggc
gggcgctga
DBGET
integrated database retrieval system
